KEGG   Methylobacterium mesophilicum: MMSR116_16570
Entry
MMSR116_16570     CDS       T06344                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mmes  Methylobacterium mesophilicum
Brite
KEGG Orthology (KO) [BR:mmes00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmes03016]
    MMSR116_16570 (rnd)
Enzymes [BR:mmes01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MMSR116_16570 (rnd)
Transfer RNA biogenesis [BR:mmes03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MMSR116_16570 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: QGY03319
UniProt: A0A6B9FN75
Position
3429468..3430655
AA seq 395 aa
MDLITSTDTLRETCARLAAQPFVTVDTEFMRETTYYPKLCLIQMAAPDGTAVLVDPLAPG
IDLQPFIDLMADERTVKVFHSARQDLEIIWLMGGVLPHPFFDTQVAAMVCGYGDSVSYEQ
LVNDVAKAKIDKSSRFTDWSRRPLSEAQLTYALSDVTHLVKVYEVLVAELLRTDRGAWLD
EEMAVLTSPDTYRAEPAQAWRRLSGRMRKPREIAVLMEVAAWREGEAQARNVPRGRVLKD
EAVIDVASAAPRNAEALARLRTIPAGFERSRTGAEILSAVERGLSRDTSEIRMPERIRRS
GGNGAIVELLKVLLKAVCEAEGVAPKIIATVDDLESLADDDAAEVPALQGWRRVLFGEKA
LALKQGRLALSVVAGRIVVRELDAMPADAEPLGNG
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggacctgatcacctcaactgacacgctgcgtgaaacctgcgcgcgtctggccgcgcag
cccttcgtgaccgtggacacggagttcatgcgcgagacgacgtattatccgaagctctgc
ctgatccagatggcggctccggacggcaccgccgtgctggtcgatccgctcgcgccgggg
atcgatctgcagcccttcatcgacttgatggccgacgagcgcaccgtgaaggtgttccac
tccgcgcgccaggatctcgagatcatctggttgatgggcggcgtgctgccgcacccgttc
ttcgacacccaggtcgccgcgatggtgtgcggctacggcgactcggtctcgtacgagcag
ctcgtcaacgatgtcgccaaggccaagatcgacaagtcctcgcgcttcaccgactggtcg
cggcggccgctttcggaggcccagcttacctacgccctgtcagacgtgacccacctcgtg
aaggtctacgaggttctcgtggccgagttgctgcgcacggatcgcggcgcttggctcgac
gaggagatggcggtgctgacctcgccggacacctatcgggccgagcccgcgcaggcctgg
cgcaggctgtcgggccggatgcgcaagccgcgcgagatcgccgtgctgatggaggtggcg
gcctggcgcgagggcgaggcgcaggcgcgcaacgttccccgcgggcgcgtcctcaaggac
gaggcggtgatcgacgtggcctcggccgcaccgcgcaacgccgaggcgctggcgcggcta
cgcaccatcccggccgggttcgagcgctcacgcacgggcgccgagatcctgtcggccgtc
gagcgcggtctgtcgcgcgacaccagcgagatccgcatgccggagcggatccgccggagc
ggcggcaacggcgcgatcgtggagctcctcaaggtgctgctgaaggccgtctgcgaggcc
gagggcgtggctccgaagatcatcgccaccgtagacgacctcgaatccctcgcggacgac
gatgccgccgaggtgccggctctccaaggctggcgtcgggtgctgttcggcgagaaggcc
ctggccctcaagcagggtcggctggcgctctcggtcgtggccggccgcatcgtcgtgcgg
gagctcgacgcaatgccggctgacgcagagcccctcgggaatggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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