KEGG   Methylobacterium mesophilicum: MMSR116_18935
Entry
MMSR116_18935     CDS       T06344                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mmes  Methylobacterium mesophilicum
Pathway
mmes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MMSR116_18935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmes03400]
    MMSR116_18935
Enzymes [BR:mmes01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     MMSR116_18935
DNA repair and recombination proteins [BR:mmes03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MMSR116_18935
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 HHH_5 AAA_11 Viral_helicase1 Helicase_RecD PIF1 HHH_2 AAA_22 AAA_16 UvrD-helicase TrwB_AAD_bind NTPase_1 nSTAND3 HerA_C T2SSE DEAD MeaB CbiA PaaX AAA_29
Other DBs
NCBI-ProteinID: QGY03740
UniProt: A0A6B9FMC9
Position
complement(3895721..3897916)
AA seq 731 aa
MNQRATPQPPDRGQPVEALAGTIERVTFHSPETGFCVLKVQARGKRDLVPVIGHAPAIGA
GEWITATGIWHTDRQHGLQFRADTLKVTPPTGIAGIEKYLASGHMRGIGPAMAKRIVAAF
GEGTFEIIEADPGRLTEVGGIGPKRAARIVAGWAEQKAVREIMLFLHAHGVGTARAVRIF
KTYGHEAIAVMTEDPYRLAKDIRGIGFKTADAIAMKLGLTREAPQRLRAGISFALQTATD
AGHCALPVAELVTLAVELLGVEAPLIRAALLEVLETGEVVQDIVGDKACIFLAGLHAAER
AIAERLLQRAQGAPPWPEIDLDRALPWVAEKTGKTLSPSQGEAVRRVLGAKLAVVTGGPG
VGKTSTLDTILRILRAKGVRVLLAAPTGRAAKRMSEQTGLEAKTLHRLLEIDPKHGGFSR
NAENPLACDLLVVDETSMVDVPLMNALTKAIPEHAGLLLVGDVDQLPSVGPGQVLADIIA
SGAVPVARLTEVFRQAAESRIVVNAHRINAGQMPEPAPRGAESDFHLIEIDEPEAAVGTL
VEVVTRRIPARFGLDPVRDVQVLTPMQRGVLGARNLNHALQAVLNPDPAISVERFGWRFS
PGDRVMESQNDYDREVFNGDLGTVARIDPEEGAVIVEFEGREVIYPYGELDTLVPAYATT
IHKSQGSEYPAVVIPVAMQHWTMLARNLLYTGVTRGKRLVVLLGQRKAVAVAVRGGTMKP
RWTKLRDWLGG
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaaccagcgagcgacgccacagccccccgaccgcggccagcccgtcgaggcgctggcc
gggacgatcgagcgcgtcaccttccacagccccgagaccggcttctgcgtcctgaaggtc
caggcgcgcggcaagcgcgacctcgtgccggtgatcggccacgcgccggccatcggggcg
ggcgagtggatcacagccaccggcatctggcacacggaccgccagcacggcctgcagttc
agggccgacaccctcaaggtgacgccgccgaccgggatcgccggcatcgagaagtacctc
gcctcgggccacatgcggggcatcggccccgccatggccaagcggatcgtcgcggctttc
ggggaaggcacgttcgagatcatcgaggccgatcccggccgcctcaccgaggtcgggggg
atcgggcccaagcgcgccgcccgcatcgtcgccggctgggccgagcagaaggccgtgcgc
gagatcatgctgttcctgcacgcccacggcgtcgggaccgcccgggcggtgcggatcttc
aagacctacggccacgaggccatcgcggtcatgaccgaggatccctaccggctggccaag
gacatccgcggcatcggcttcaagaccgcggacgccatcgcgatgaagctcgggctcacc
cgggaggcgccgcagcgcctgcgggccgggatctcgttcgccctgcagaccgccaccgat
gccggtcactgcgccctgccggtggccgagctcgtcaccctggcggtcgagctgctgggc
gtggaggcgcccctgatccgcgcggcgctgctcgaggtcctggagaccggcgaggtcgtg
caggacatcgtgggcgacaaggcctgcatcttcctggccggcctgcacgccgccgagcgg
gccatcgccgagcggctgctgcaaagggcgcagggcgcgccgccctggccggagatcgac
ctcgaccgggcgctcccctgggtggcggagaagaccggcaagacgctctcgccctcgcag
ggcgaggcggtgcggcgcgtgctcggcgccaagctcgccgtggtgaccggcggcccgggg
gtgggcaagacctcgaccctcgacacgattctgcggatcctgcgggcgaagggcgtgcgg
gtgctgctcgccgcccccaccggccgggccgccaagcggatgagcgagcagacggggctg
gaggccaagaccctccaccgcctgctggagatcgacccgaagcacggcggcttctcgcgc
aacgcggagaacccgctggcctgcgacctgctcgtcgtcgacgagacctcgatggtcgac
gtgccgctgatgaacgccctgaccaaggcgatccccgagcacgcgggcctgctgctggtc
ggcgacgtcgaccagctgccatcggtcgggccggggcaggtgctcgccgacatcatcgcc
tccggcgccgtgccggtggcgcggctaacggaggtttttcggcaggcagccgagagccgg
atcgtggtgaacgcccaccggatcaatgccggacagatgcccgaaccggccccgcgcggc
gcggagagcgacttccacctcatcgagatcgacgagcccgaggcggccgtcgggaccctg
gtcgaggtggtgacgcggcgcatcccggcccggttcggcctcgatccggtgcgcgacgtg
caggtgctcaccccgatgcagcgcggggtgctcggcgcgcgcaacctcaaccacgccctc
caggcggtgctgaacccggacccggcgatctcggtggagcggttcggctggcgcttctcc
cccggcgaccgggtgatggagagccagaacgactacgaccgggaggtgttcaacggcgac
ctcggcaccgtggcgcgcatcgacccggaggagggcgcggtgatcgtcgagttcgagggg
cgggaggtgatctatccctacggcgagctcgatacgctggtgccggcctacgccacgacg
atccacaagtcgcaagggtcggaatacccggcggtggtgatcccggtggcgatgcagcac
tggaccatgctggcgcgcaacctcctctacacgggcgtgacccgcggcaagcggctggtc
gtgctgctcgggcagcgcaaggcggtggcggtggcggtccgcggcggcacgatgaagccg
cgctggacgaagctgcgggactggctgggcgggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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