KEGG   Methanococcoides methylutens: MCMEM_0720
Entry
MCMEM_0720        CDS       T03913                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mmet  Methanococcoides methylutens
Brite
KEGG Orthology (KO) [BR:mmet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmet03032]
    MCMEM_0720
   03400 DNA repair and recombination proteins [BR:mmet03400]
    MCMEM_0720
Enzymes [BR:mmet01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MCMEM_0720
DNA replication proteins [BR:mmet03032]
 Prokaryotic type
  DNA Topoisomerases
   MCMEM_0720
DNA repair and recombination proteins [BR:mmet03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MCMEM_0720
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim HHH_5 DNA_pol_lambd_f IMS_HHH Cdd1 DUF4332 HHH Zn_ribbon_recom TfoX_C BAF RAD51D_N
Other DBs
NCBI-ProteinID: AKB84773
UniProt: A0A0E3SR86
Position
complement(754426..756648)
AA seq 740 aa
MHLIIAEKHIAAKRIAAILAPKKPKQVRVSGMDTYEFKDEDRTVVMGLSGHIVQLDFPKA
YNNWQKVESKELIDADVITTPTHVKIVNALKKLGKEATHVTIATDYDREGELIGVEALEI
IKKVNPEVDFDRVFYSAITKKEIDDAFANPAAIDFNLADAGHSRQVIDLVWGASLTRYLS
ISAGRLGKLFLSVGRVQSPTLALIVDKEKERQAFIPKPYWEIYATLRDKSGELFNVQHKT
QKFWDRGEAQKVMDIIGDNATVSSVVRSKKKDKPPTPFNTTEFIGAASSIGYSAANAMRI
AESLYTSGFISYPRTDNTVYPESIDLRAQIEVFKKGTFKEYAEKLLAKDKLVPTRGKKET
TDHPPIYPASLAKKNELNDQEWKLYELVVRRFFATFAEEAEWETLKVRFDIEGEEFKANG
ARLLHAGWRWYYPYNAPQDRLLPALEEGDVLSIKSKEMLDKETQPPGRYGQGRLIKLMEE
LGLGTKATRHDIISKLYSRAYVHGNPLQPTKTAFAVVEALEKYAPTITKHDMTSQLEEDM
DRIAEGNIQEENVLNESRKMLHDVFAEFDENTEKISESLRAGLREDKVIGICKECGSKLM
VRRSKRGSRFIGCDGYPDCNFSLPLPKSGQVIVTDKVCEEHGINHIKIINPGKRPWDLGC
PQCNFIEWKKTQEEEKRKQPETPRPEKITDVPGIGKVTAKKLEDAGVSTVDELEEVNARE
LSKNTGISVGKIMKWQEAIA
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgcatcttatcatagcagaaaagcacattgcagccaaaaggatagcagctatccttgca
cccaagaaaccaaagcaggtccgtgtcagtggaatggacacatacgagttcaaggacgag
gacaggactgtcgttatgggtcttagcggacacattgtccagctggacttcccgaaagca
tacaacaactggcagaaagtagagtcaaaggaactcatcgatgcagatgtcattaccaca
cctacccacgtaaagatcgtgaatgcccttaaaaaactgggaaaggaagcaactcacgta
acgattgctactgactacgacagagaaggagagcttattggtgtcgaagcactggagatc
atcaagaaagtgaacccggaagtggactttgaccgtgtgttctacagtgcgatcacaaag
aaagagatcgatgatgcttttgcaaatcctgcagctattgacttcaatcttgctgatgca
ggccattccagacaggtgattgacctggtgtggggtgcatcgcttacaagatacctttca
atatcagcaggcaggttaggcaagctatttttatctgtaggaagggtgcaatcgccaaca
cttgcactgatcgttgacaaagaaaaggaaagacaggcctttatcccgaaaccatactgg
gagatctatgcaaccctcagggacaagagtggcgagctcttcaatgtccagcacaagacc
cagaagttctgggacaggggagaagctcaaaaggttatggacatcattggtgacaatgca
acggtctcctcggttgtcaggtctaagaagaaagacaagccacctacgccgttcaacact
accgagttcataggtgctgcaagttccataggttatagtgccgctaatgccatgaggatc
gcagaatcactctatacaagcggtttcatatcatacccgaggaccgacaacacggtctat
ccggaatccatcgacctgagagcacagatcgaagtattcaagaagggtactttcaaggaa
tacgctgaaaaactgctcgcaaaggacaagctcgtccctacccgtggtaaaaaagaaacc
accgaccaccctcctatctatcctgcatcccttgcaaaaaagaacgagctcaatgatcag
gaatggaagctctacgaactggtggtcagaaggttctttgcaacctttgctgaagaggca
gagtgggaaaccctgaaggtcaggttcgacattgaaggtgaggagttcaaggctaacggt
gccagactgcttcatgccggatggagatggtactacccatacaatgctccacaggacagg
cttctccctgccctggaagaaggtgatgttctcagcataaagagcaaggagatgctggac
aaggagacccagccacctggaagatacggacagggaaggcttatcaagctcatggaagag
ctgggacttggaacaaaggcaacacgtcacgatatcatcagcaagctatattcaagggca
tacgttcatggtaacccgcttcaacctacaaagacggcttttgcagtggtagaggccctt
gaaaaatacgcccctactatcacaaagcatgatatgacgagccagctggaagaagatatg
gaccgtattgcagaaggcaatatacaggaagagaatgtccttaatgaatcaaggaagatg
ctccatgatgtgttcgctgaattcgatgagaatacggaaaaaatatcagaatcgctccgt
gccggccttcgtgaggataaggtcatcggcatctgtaaagaatgcggttcaaaattaatg
gtcaggcgttcaaaacgaggttcgaggttcataggttgtgacggctatcctgactgtaat
ttctcattgccacttccaaagagcggacaggtcattgtgaccgataaagtctgtgaggaa
catggtatcaaccatataaaaatcataaatccaggtaagcgaccatgggaccttggttgc
ccacaatgtaattttattgaatggaagaagacacaggaagaagagaaacgcaagcagcct
gaaactccaagacccgagaagatcacggatgttcccggcatcgggaaagttacagctaaa
aagctggaggatgcaggcgtttcaactgtggatgaacttgaagaggtcaatgccagagaa
ctttcaaagaacacgggaatatccgtgggaaagatcatgaagtggcaggaagcaattgca
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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