KEGG   Mycobacterium marinum M: MMAR_1090
Entry
MMAR_1090         CDS       T00694                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase (alpha chain), RpoA
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mmi  Mycobacterium marinum M
Pathway
mmi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mmi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MMAR_1090 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmi03021]
    MMAR_1090 (rpoA)
   03400 DNA repair and recombination proteins [BR:mmi03400]
    MMAR_1090 (rpoA)
Enzymes [BR:mmi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MMAR_1090 (rpoA)
Transcription machinery [BR:mmi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MMAR_1090 (rpoA)
DNA repair and recombination proteins [BR:mmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MMAR_1090 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2
Other DBs
NCBI-ProteinID: ACC39546
UniProt: B2HCX4
Position
1309999..1311042
AA seq 347 aa
MLISQRPTLSEEVLTDSRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKALVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PNMRIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKNSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPPSFDPSEVAGYDVATGTWSTEGAYDDQDYAETEQL
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgctgatctctcagcggccgactctgtccgaggaagtcctcaccgacagccggtcccag
ttcgtcatcgaaccgctggaacccggattcggctacacccttggcaactcgctgcgtcgc
acgctgctgtcctcgattcccggggcagccgtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccacggtgcccggagtcaaggaagatgtcaccgacatcatcctgaacctc
aaggccctggtcgtttcttcggaggaagacgagccggtcaccatgtacctgcgcaagcag
gggcccggtgaggtcaccgcgggcgacatcgtgccgccggccggtgtcacggtgcacaac
cccaacatgcgcatcgccaccctcaacgacaagggcaagctggaggtcgagctcgtcgtc
gagcgcggccgcggttacgtcccggcagtgcagaaccgggcttcgggcgccgaaatcggc
cgcatcccggtcgattccatctactcgccggtgctcaaggtcacctacaaggtggacgcg
actcgtgtcgagcagcgcaccgacttcgacaagctgatcctcgatgtcgagaccaagaat
tcgatcaccccgcgcgacgcgctggcatctgcgggcaagacgctcgtcgaattgttcggt
ctggcacgtgaactcaacgtcgaggccgaaggtatcgagattgggccgtcgccggccgag
gccgaccacatcgcctcgttcgcactgccgatcgacgatctggatctgaccgtgcgctcg
tacaactgcctcaagcgcgagggcgtgcacaccgtcggcgaactggtgtcgcgcaccgag
tcggatttgctcgacatccgcaacttcggtcagaagtcgatcgatgaggtcaaggtcaag
ctgcaccagctgggcctgtcgctcaaggacagcccgccgagcttcgacccgtctgaggtc
gcaggctacgacgtggccaccggtacctggtcgaccgagggcgcctacgacgaccaggac
tacgccgaaaccgaacagctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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