KEGG   Mycobacterium tuberculosis variant microti: RN08_3978
Entry
RN08_3978         CDS       T04291                                 
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
mmic  Mycobacterium tuberculosis variant microti
Pathway
mmic00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mmic00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RN08_3978
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mmic01007]
    RN08_3978
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmic03016]
    RN08_3978
Enzymes [BR:mmic01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     RN08_3978
Amino acid related enzymes [BR:mmic01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   RN08_3978
Transfer RNA biogenesis [BR:mmic03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    RN08_3978
 Prokaryotic type
   Other AARSs
    RN08_3978
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AMC61405
Position
complement(4019223..4020740)
AA seq 505 aa
MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED
IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH
GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL
RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR
CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI
GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI
HDNRGFGRGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG
IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID
RLLMSLTGLSIRETVLFPIVRPHSN
NT seq 1518 nt   +upstreamnt  +downstreamnt
gtgagtgccgctgacacagcagaagaccttcctgagcagttccggattcgccgggacaag
cgcgctcgcttgctggcccaggggcgcgatccctatcccgtcgcggtgccgcgcactcac
acgttggccgaggttcgcgccgcccaccctgacttgccgatcgataccgcgaccgaagac
atcgtcggcgtcgcgggccgagtgatctttgcgcgcaactcgggaaagctatgctttgcg
acacttcaggacggcgatggtacccagctgcaagtgatgatcagcctcgacaaggtcggc
caggctgctctcgacgcatggaaagccgatgtcgacctgggcgacatcgtctacgtgcat
ggcgcggtgatcagttcgcgccgcggcgagctgtccgtcctggcggattgctggcggatc
gccgccaagtcgctgcggccgcttcccgtcgcgcacaaagagatgagtgaagagtcgcgg
gttcgtcagcgctatgttgacctcatagttcgaccggaagcgcgcgcggtggctcgacta
cggatcgccgtcgtccgcgcgatccggacggcgcttcaacgtcgtgggttcctggaagtc
gagacgcccgtcttgcagacgttagccggtggtgcggcggcccgtccgttcgccactcat
tccaatgccctagacatcgatctgtacctgcggatcgcgccggaactgttcctcaagcgc
tgcatcgtgggtggtttcgacaaggtcttcgaacttaatcgagtgttccgaaacgaagga
gccgattccacgcattctccggaattctccatgctggagacctaccagacctacggaacc
tatgacgattcggcagtcgtcacccgggagcttattcaagaggtggccgatgaggcgatc
ggaaccagacaactgccgttgcccgacggcagtgtctatgacatcgacggagaatgggcg
actatacaaatgtacccgtcgctgtctgtggcgctcggtgaagagatcacaccgcagacg
acggtcgatcgcttacgtgggatcgccgatagccttggcctggagaaagacccagcgatt
catgacaaccgtggcttcggccgcggcaaactcatcgaggaactctgggagcgcacagtg
ggcaagagcttgagcgcacccacatttgtcaaggattttccggttcagacaacgcctttg
acccgtcagcaccgcagtatccccggcgtaaccgagaagtgggacctctatctgcgcgga
atcgaacttgccaccggctactcggaattaagcgacccggtagtccagcgggagagattc
gccgaccaggcccgtgccgcggccgctggcgatgacgaagcgatggtgcttgacgaggat
tttctggccgctctggagtacggcatgccaccgtgcaccggaaccggaatgggtatcgat
cggttgttgatgtctttgactgggttgtcaattagggagacagttttgttcccgattgtt
cgaccacactccaactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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