KEGG   Mycobacterium tuberculosis variant microti: RN08_4093
Entry
RN08_4093         CDS       T04291                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
mmic  Mycobacterium tuberculosis variant microti
Pathway
mmic03030  DNA replication
mmic03430  Mismatch repair
mmic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RN08_4093
   03430 Mismatch repair
    RN08_4093
   03440 Homologous recombination
    RN08_4093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmic03032]
    RN08_4093
   03400 DNA repair and recombination proteins [BR:mmic03400]
    RN08_4093
Enzymes [BR:mmic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RN08_4093
DNA replication proteins [BR:mmic03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RN08_4093
DNA repair and recombination proteins [BR:mmic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RN08_4093
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AMC61520
Position
complement(4128345..4129334)
AA seq 329 aa
MSHTWGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVD
PGPTHVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELP
VDFVMCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARE
LDVWLPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLA
AEVKRTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARF
MECIGAVVGGASVEDFTDVAPVEKQLALF
NT seq 990 nt   +upstreamnt  +downstreamnt
gtgagccacacctggggacggccagccagccaccaggatcggggttgggccgtcatcgac
gtcgagacctcgggctttcggccgggccaggcccggatcatcagccttgcggtgctcggc
ctggacgccgccggccgactagagcaatccgtggtcagcctgctaaatcccaaggtggac
ccgggccccacccacgtgcacggcctgaccgccgccatgctcgatgaccagccacagttc
gccgatatcgccggtgaggttgtcgacgtgctgcgcgggcgcactctggtcgcgcacaat
gtcgcgttcgactatgcgtttctcgctgcggaggccgagatcgccgaggccgaactcccg
gttgacttcgtcatgtgcacggtcgagctggcccgccggctgcagcttggcgtcgacaat
ctgcggctggagacacttgccgcgcattggggtgtgccccagcaacggccgcacgatgca
ttcgacgacgcccgggtattgaccgggatactggcagctgccctagagagtgcgcgcgaa
ctcgacgtctggctgccggtgcacccggtgacacggcgccggtggcccaacggccgggtg
actcacgacgagctgcgaccgctgaaggccttggcagcccggatggcctgcccctacctc
aacccgggccggtatgtccagggccgcccgctggtccagggcatgcgggtggggctggcg
gccgaggtaaaacggacccacgaggaactcgtcgaacggattctgcacgccgggctggcc
tacagcgacgtcgtagaccgggatacctcactggtggtctgcaacgcgaccgcccccgaa
cacggcaagggctatcacgccctgcagctgggggttccggtgatgcctgaagcgcgattc
atggagtgcatcggtgccgtcgtcgggggcgccagcgtggaggacttcaccgacgtcgct
cccgtcgaaaagcagttagcgttgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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