KEGG   Mycoplasma mobile: MMOB1950
Entry
MMOB1950          CDS       T00176                                 
Symbol
lig
Name
(GenBank) NAD(+)-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mmo  Mycoplasma mobile
Pathway
mmo03030  DNA replication
mmo03410  Base excision repair
mmo03420  Nucleotide excision repair
mmo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MMOB1950 (lig)
   03410 Base excision repair
    MMOB1950 (lig)
   03420 Nucleotide excision repair
    MMOB1950 (lig)
   03430 Mismatch repair
    MMOB1950 (lig)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmo03032]
    MMOB1950 (lig)
   03400 DNA repair and recombination proteins [BR:mmo03400]
    MMOB1950 (lig)
Enzymes [BR:mmo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     MMOB1950 (lig)
DNA replication proteins [BR:mmo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MMOB1950 (lig)
DNA repair and recombination proteins [BR:mmo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     MMOB1950 (lig)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MMOB1950 (lig)
   MMR (mismatch excision repair)
    DNA ligase
     MMOB1950 (lig)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MMOB1950 (lig)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD BRCT_2 PTCB-BRCT
Other DBs
NCBI-ProteinID: AAT27681
UniProt: Q6KI95
Position
complement(261127..263142)
AA seq 671 aa
MKVKSKMNDNEKNNRIISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQ
YKFLDNSDSPTKNIGAKVSKKFSKVQHQFPMLSLNKAYKFDDLKIFERHINKLGFFPNYF
LELKIDGLSISLKYDNGNLIQALTRGDGISGEDVTENVFQIQDIPKQIKYSKPIEIRGEI
YLSKSTFYEINECQKSQNLTIFANPRNAASGSLRQLDSSIVKERKLNSFFYSVTNPLDHK
IKNFNDQELFLKENNFQVPSLNKFVDTIEKAYEFIKDFEKNNYREKLNYEIDGIVVKVDD
FSLYDILGQTSKFPRSMIAFKFSDISIETKLIDIFISVGRTGKITYNAILEPVIINGTLV
SAATLHNYEYVESLKLNKNDNVKIIKAGEIIPKVVSLSKKNSETIFKRIEYCTSCNEKLV
QPEDEVDQYCINKKCLMIRLRKIEHFASKKAMNILGLGFQNIEKFFKLGILTKYSDLFFL
EKYKNLIESQPSFGEKSFNNLIESINRSKSNSLEKFIFAIGIKQIGERSAKLIANEVKLL
SNLINFDFEKLNNIRDISCKTINSLKCFFSDENEIEEIKIILELGLDFKNLENEFESKKL
QGLNFVITGTLSKPRDFFKELIIKNGGNVLNSISNRINYLLTGEKSGSKIEKAQKINTIK
ILDENEFNKLI
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaaagtaaaatcgaaaatgaatgataatgaaaaaaataatagaattatttctgagtac
aatgatttaaaaaataaaattaacctttggaacaaagcatattttgattacgatgaacca
cttgttgaagatagtatttatgatgctactttattaaagttaataaaatttgaaaatcaa
tataaatttttagataattctgattcaccaaccaaaaatataggagcaaaagttagtaaa
aaattttcaaaagttcaacatcaatttccgatgctcagccttaataaagcttataaattt
gatgatttaaaaatttttgaaagacacattaacaaattaggtttttttccaaattatttt
ttagaattaaaaatagatggtttaagcatttcattaaaatatgataatggaaatcttatt
caagcattaactagaggcgatggaataagtggtgaagatgtaacagaaaatgtgtttcaa
atacaagatattcctaagcaaataaaatattcaaaaccaattgaaataagaggagaaata
tatttatctaagtcaactttctatgaaataaatgaatgtcaaaaatcacaaaatttgaca
atttttgcaaacccgagaaatgcagcaagtggaagtttaaggcaattagattcttcaata
gtaaaagaaagaaaacttaattcatttttttattcagttacaaatccactagatcataaa
ataaaaaattttaatgaccaagaactctttttaaaagaaaataattttcaagttccatct
ttaaataaatttgtagacacaattgaaaaagcttatgaattcattaaagattttgaaaaa
aataattatagagagaaattaaattatgaaatagatggaattgtcgtaaaagtagatgat
ttcagcctttatgacattcttggtcaaacttctaaatttccaagatccatgattgccttt
aaatttagtgatatttcaatagaaactaaattaattgatatttttatttctgtaggaagg
acaggaaagattacatataatgctatattagaaccagtaattattaatggaactcttgtt
agcgctgcaactcttcataattatgaatatgtagaatctctaaaattaaataaaaatgat
aatgtaaagattattaaagcaggagaaatcattccaaaagttgtttccttaagtaaaaaa
aactctgaaacaatttttaaaagaattgaatattgtacatcctgtaatgaaaaattagtt
caaccagaagatgaagtagatcaatattgcataaacaaaaaatgccttatgattaggtta
agaaaaatcgagcactttgcttccaaaaaagcaatgaatattctcggtctaggttttcaa
aatattgaaaaattttttaaactaggaattttaactaaatattcagacttatttttttta
gaaaagtataaaaatttaatagaatcgcaaccttcttttggagaaaaatcatttaataat
ttaattgaatcaataaatcgatcaaaaagcaactctttagaaaaatttatttttgctatc
ggaattaaacaaattggtgaaagatctgcaaaattaattgcaaatgaggtcaaattacta
tctaatttgataaattttgactttgaaaaattgaataatattagagatatttcttgcaaa
acaatcaattctttaaaatgtttttttagtgatgaaaatgaaattgaagaaattaaaata
attttagaattaggattggattttaaaaacttagaaaatgaatttgaatcaaaaaaactt
caaggcttaaattttgtaattactggaactctttcaaagccaagagacttttttaaagaa
ttaataataaaaaacggtggaaatgttttaaattctattagcaatagaattaattatttg
cttaccggagaaaaatctggttcaaaaatagaaaaggctcaaaaaataaatacaataaaa
attttagacgagaatgaattcaataaattaatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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