KEGG   Janthinobacterium sp. Marseille: mma_0534
Entry
mma_0534          CDS       T00561                                 
Symbol
dnaE1
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
mms  Janthinobacterium sp. Marseille
Pathway
mms03030  DNA replication
mms03430  Mismatch repair
mms03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    mma_0534 (dnaE1)
   03430 Mismatch repair
    mma_0534 (dnaE1)
   03440 Homologous recombination
    mma_0534 (dnaE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mms03032]
    mma_0534 (dnaE1)
   03400 DNA repair and recombination proteins [BR:mms03400]
    mma_0534 (dnaE1)
Enzymes [BR:mms01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     mma_0534 (dnaE1)
DNA replication proteins [BR:mms03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     mma_0534 (dnaE1)
DNA repair and recombination proteins [BR:mms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     mma_0534 (dnaE1)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C GHMP_kinases_C DUF655
Other DBs
NCBI-ProteinID: ABR89120
UniProt: A6SVC7
Position
605048..608506
AA seq 1152 aa
MISPQFIHLRLHSEYSIVDGLIRIDDVIQAAAADMQPALAISDLANLFGMVKFYKEARSN
GIKPIVGCDVWISNDNDRDKPSRLLLLVKNKDGYLQLCELLSKAWLTNLHRGRAEIRPEW
LEQVAADGKNGLIVLSGAHFGDVGIAIDNGNLGAAERCAQRWAELFPGHFYIEVQRAGQP
NMDGHVRQASVLAAKLGLPLVATHPVQFLGLEEFTAHEARTCISEGEILANPRRIKRFNE
QQRFKTQAEMAELFADMPNALQNSVEIAKRCNLVLELGKPKLPNFPTPDGSSIDEFLVKE
AQRGLDQRMEHLYPDPAAREKHRERYQARLKFETDTIIKMGFPGYFLIVADFIKWAKNNG
VPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQEGRDRVI
QYVKDQYGKDAVSQIATFGTMAAKGAVRDVGRVLDFGYNFCDGISKLIPFKPGKLVTISD
AIKEEPLLAERLENEEEVKQLLDLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGG
DAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKDLDPAMADFALEKLPLNDRP
SYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKHG
ERFEYPDPRTESILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAEH
RELFRAGASKNDLSAEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAFM
AANLSLAMDDTDKIKILVEDAIDICGLSLLPPDINQSDYRFTPVGVPGKKATQIRYGLGA
VKGSGKGAIDAVIEARKERPFTDLFDFAKRVDKRQINRRTIDSLIRAGAFDCFDVDRAIL
LASVAFAMECAEQAEAAANQVSLFGGDDSDLETPPEYVKVSPWSDKQKLTEEKAALGFYL
SGHLFNAYADEARRFARAKLSSLEPSREPRTIAGVISGLRTQMTQRGRITIVTLDDGSAT
VDVTVYNELYDANRHMFKEDEFLAVTGKVSEDRFSGGLRITAEKVMDIAGVRIQYANCVR
LSLPASTDINVLKATLQPAARADGSPVVIQYQNPKGVSELCFAEQWRINPDDNIKQKLID
LYSDKNVQIAYD
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgatttctccgcaatttatccatcttcgtctccattccgaatattcgatcgttgatggc
ctgatccgcatcgatgatgtgatccaggccgctgccgccgatatgcagccggcgctcgcg
atttccgacctggccaatctgttcggcatggtcaaattctataaagaagcccgttccaac
ggtatcaagcccatcgtcggctgtgatgtctggatcagtaatgacaatgaccgcgacaag
ccgtcgcgcctgttgctattggtcaagaacaaggacggttacctgcagctgtgtgaattg
ctgtcgaaagcctggctgaccaatttgcaccgcggtcgtgccgaaattcgccccgagtgg
ctggagcaggtggcggcggatggcaagaatggtttgatcgtcttgtccggcgcgcatttt
ggtgatgtcgggatcgccatcgataacggtaacctgggtgcagccgagcgttgtgcgcag
cgctgggcggaattattccccggtcatttttatatcgaggtacagcgtgccggccagccg
aatatggacggtcatgtgcgccaggcttcggtgctggccgccaagctgggcttgcccctg
gttgcgacccatccggtgcaattcctcggcctggaagaattcactgcgcatgaagcgcgc
acctgtatttccgaaggcgaaatcctcgcgaacccgcgccgcatcaaacgctttaatgag
cagcaacgcttcaagacgcaggcggaaatggcggaactcttcgccgatatgccgaacgcc
ctgcaaaactcggtcgaaattgccaagcgctgcaacctggtgctggaactcggcaaaccc
aagctgccgaacttcccgacaccggacggttcatcgattgatgaattcctggtcaaggaa
gcgcagcgcgggctggatcagcgcatggagcatttgtatcctgatcctgccgcacgtgaa
aagcaccgggaacgttatcaggcgcggctgaagttcgagaccgacaccattatcaaaatg
ggtttccccggttacttcctgatcgtggcggactttatcaaatgggcgaagaataacggc
gtgccggttggaccgggccggggttctggtgccggttcgctggttgcgtattcattgctg
attaccgatctggatccgctgcaatacaacctgctgttcgaacgcttcctgaatccagaa
cgggtatccatgcccgatttcgatatcgacttttgccaggaagggcgcgatcgcgtcatc
cagtacgtgaaggatcagtacggcaaggatgcggtatcgcagattgcaaccttcggtacc
atggccgccaaaggtgcggtgcgtgacgttggtcgtgtgctggattttggttataacttt
tgcgatggcatctccaagctgattccattcaagccgggcaagctggtcacgatttccgat
gcgatcaaggaagaaccgctgctggccgagcgcctggaaaatgaagaagaggtcaagcaa
ttgctggacctggcgcaacaggtggaaggtatcgcccgtaacatcggtatgcatgccggt
ggcgtgttgattgcaccgggcaagctgaccgatttctgtccgctctacacgcagggtggt
gatgccggcgtggtctcgcaatacgataaggatgacgtcgaggcggtcggcctggtgaag
ttcgacttcttgggtttgaccacgctgactattctcgatcgtgcggtgcgttacatcaag
gacctcgatccggcgatggcggattttgcgctggaaaagctgccgctcaatgaccggcct
tcatacgaattactgaccaaggcgaaaaccgtcgctgtcttccagctggaaagccgcggc
atgcaaggcatgctcaaggatgcacggccggatcgttttgaagacattattgcgctggtg
gctttgtaccgtccgggcccgatggacctgatcccggatttttgccgacgcaagcacggt
gaacgtttcgaataccctgatcctcgtaccgaatccatcctgtccgaaacctacggcatc
atggtgtatcaggaacaggttatgcagatggcgcaggtcatcggcggttactcgctgggc
ggcgctgacttgctgcgccgtgcgatgggtaagaaaaaagccgaagagatggcggaacat
cgtgaattgttccgcgccggcgcatcgaaaaatgatttgtccgctgaaaaagccgatgaa
attttcgatttgatggaaaaatttgccggctacggtttcaataaatcgcatgccgctgcc
tacgccttgctgtcgtatcacaccgcctacctgaaggcgcatcaccccgccgcgttcatg
gcagccaacttgtcgctggcgatggatgataccgacaagatcaagatcctggtcgaagat
gcgattgatatatgcggcttgagcttgctgccgccggatatcaatcaatccgattatcgt
ttcacgccggtcggcgtgccgggcaagaaggcaacgcagatacgttatggtttgggcgcg
gtcaaaggttccggcaagggtgccattgatgccgtgatcgaagcgcgcaaggaacggcct
ttcactgatttgttcgacttcgccaagcgggtcgacaaacgccagatcaatcgccgtacg
atagattcgctgatccgtgccggtgccttcgattgcttcgatgttgatcgcgccatcctg
ctggcatcggttgctttcgcaatggaatgcgcggagcaggcggaagccgccgccaaccag
gtcagcctctttggcggtgatgacagcgacctggaaacgccaccggaatacgtaaaagta
tcgccatggagcgataagcaaaagctgacggaagaaaaagctgcactcggtttctacctg
tccggccacttgttcaatgcctatgcggacgaggcacgtcgctttgcccgtgccaagctg
agtagcctggagccgtcacgcgagccgcgcacgattgccggtgtgatctccggtttgcgt
acacaaatgacgcagcgtggccgtattacgattgtgactttggatgatggcagtgccacg
gtggatgtgacggtctataacgagttgtatgatgccaaccgtcatatgtttaaggaagat
gaattccttgcggtaaccgggaaggtatcggaagaccgcttctccggcggcttgcggatt
accgcagaaaaggtgatggatattgccggagtgcgtatccagtatgccaattgcgtacgc
ttgtcattgccggcttcgaccgatatcaatgtgctgaaggcgacgctgcaaccggcggct
cgcgcagacggtagtccggtcgtgatccagtatcagaatcccaagggcgtatcggaattg
tgctttgccgagcaatggcgtatcaatccggacgacaacataaaacaaaaactaatcgat
ttatattcggacaaaaatgtacagatcgcctatgactga

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