KEGG   Methylomonas methanica: Metme_0707
Entry
Metme_0707        CDS       T01511                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mmt  Methylomonas methanica
Pathway
mmt02020  Two-component system
mmt02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mmt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Metme_0707
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Metme_0707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmt03021]
    Metme_0707
Transcription machinery [BR:mmt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Metme_0707
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 YabA
Other DBs
NCBI-ProteinID: AEF99148
UniProt: G0A4Y5
Position
755273..756709
AA seq 478 aa
MKQSLQLRIGQSLTMTPQLQQAIKLLQMSTLDLQQEIQQALESNMMLEVEEDDLPTLEYR
EKQSENSDQVTSEGSQTDMPDELPVDVSWDDVYESALPAGDDSSDSAEFETFRGKTQTLQ
DHLIWQLELTHVSERDYAIAVGIIDAINDDGYVATDLNDIYQGLLEQLEDLEMDEVQAVL
HMIQNFDPVGVGALDLADCLRLQVLQLPDDTPFKADALDFVSRHLELLATCDQARLMKRV
GFSEEQLKGVLALIRSLDPKPGARLQEMDVEYVVPDVFVHKVKDQWQVTLNPDIAPKLRI
NPFYSGMIKRADNSQDNVSMKNHMQEARWFIKSLHSRNDTLLRVAKSIVEKQGEFFEHGP
IAMKAMVLRDIAEELELHESTISRVTTQKYMHTPQGVIEFKYFFSSHVSTEGGGECSATA
IRALIKELVGNENPAKPLSDSKISDLLNEKGINVARRTIAKYREAMSIPSTSQRKRLI
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgaagcaatctttacagctcagaattggtcagagcctgacaatgacgccgcaactgcaa
caggcgatcaaattattgcagatgtcgaccttggatttgcagcaggaaatccagcaggcg
ttggagtccaacatgatgttggaagtggaagaagacgatttacctaccttggagtacagg
gaaaaacagtcggaaaattccgaccaagtcaccagcgaaggctcgcaaaccgatatgccg
gatgaactgccggtcgatgtcagctgggacgacgtctatgaaagtgccttgccggcggga
gacgattcgtccgacagcgccgaattcgaaacctttcgaggtaaaacccaaaccttgcag
gatcatttgatctggcagctggaattgacgcatgtttccgagcgcgactacgccattgcg
gtggggattatcgacgccattaacgacgacggttatgtcgccactgatttgaacgatata
taccagggcttgttggagcagttggaagacttggaaatggatgaagtgcaggccgttttg
cacatgattcagaatttcgatccggtcggtgtcggtgccctggatttggccgattgcttg
cgtctgcaagtgttgcaattgccggatgatacgcctttcaaggccgacgccttggatttc
gtgtcccgacatttggagttgttggccacttgcgatcaggctcgcctgatgaagcgggtc
ggtttcagcgaggaacaattgaagggtgtcctggccttgatcagaagtttggatcccaag
cccggcgcgcgcctgcaggaaatggatgtggagtacgtggtgcccgatgtatttgtgcac
aaggtcaaggatcaatggcaggtcacgctcaatcccgatatcgcaccgaagttgcgcatc
aacccgttctactcgggcatgatcaagcgggcggacaacagccaggacaatgtcagcatg
aaaaaccacatgcaagaggcgcgttggtttatcaaaagcctgcacagccgcaacgatacc
ttgttgcgggtggccaaaagcatcgtggaaaaacagggcgagtttttcgagcacggtccg
attgccatgaaggccatggtactgagggatatcgccgaggaactggagctgcatgaatcc
accatttcccgggttaccacacagaaatacatgcacaccccgcagggtgtaatcgaattt
aaatatttcttctccagtcatgtcagcactgaagggggaggcgagtgctcggccacggcg
atcagagcactgataaaagagttggtgggtaacgaaaacccggccaaaccactaagcgat
agtaaaatatccgacttattgaatgagaagggcattaatgtggcgcggcgtactattgca
aaataccgcgaagccatgtcgattccttccaccagccagcggaaaaggctaatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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