KEGG   Methylomonas methanica: Metme_2792
Entry
Metme_2792        CDS       T01511                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mmt  Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:mmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmt03021]
    Metme_2792
Transcription machinery [BR:mmt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Metme_2792
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_16 Phage_antitermQ HTH_20 HTH_24
Other DBs
NCBI-ProteinID: AEG01174
UniProt: G0A035
Position
complement(3081501..3082091)
AA seq 196 aa
MNESTRLSEDLDQDLVRRVQQGDKSAFDLLVIKYQHRIVHLVNRYVKDPSEAQDVAQDSF
IKAYKALGDFRGDSAFYTWLYRIAINTAKNYLLSRSRRHSDYEVDMQDAEQTENAPQLKD
IETPEHQLMNDQIIAVIKSAIEKLPEEMRIAITLREFEGMSYEEIAEAMDCPIGTVRSRI
FRAREAIDEKLNPLLG
NT seq 591 nt   +upstreamnt  +downstreamnt
gtgaacgaatcaacaaggctctccgaagatttagatcaggacttggtgcgaagagtccag
caaggcgacaaatcggccttcgatcttctcgttatcaagtatcaacacaggattgtgcac
ctggtcaaccggtacgtaaaagaccccagcgaagcgcaggacgtggcgcaggattctttt
atcaaagcctataaagccttgggtgattttagaggcgatagcgctttttacacttggtta
tatcgaatagcgattaataccgctaagaactatctgctgtcgcgttccaggcggcattcc
gactacgaagtggatatgcaggatgccgaacaaaccgagaacgcgccgcagttaaaggat
atagaaacaccggagcaccaattgatgaacgatcagattattgcggtaatcaaatcggcc
atcgagaaattgcccgaagaaatgcgcattgccataaccctgcgggagtttgaaggcatg
agctatgaagagattgccgaagccatggattgcccgattgggaccgtgcgctctcggata
tttagagcccgcgaggctatcgacgaaaaattaaaccccttgttgggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (55)   

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