KEGG   Methylomonas methanica: Metme_3013
Entry
Metme_3013        CDS       T01511                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mmt  Methylomonas methanica
Pathway
mmt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Metme_3013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmt03400]
    Metme_3013
Enzymes [BR:mmt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Metme_3013
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Metme_3013
DNA repair and recombination proteins [BR:mmt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Metme_3013
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zinc-ribbons_6
Other DBs
NCBI-ProteinID: AEG01391
UniProt: G0A2N8
Position
3345933..3346748
AA seq 271 aa
MPELPEVETSRRGITPHVLGKTFKDVIIRQPQLRWPVPEGLNSILPGLHLDKIERRGKYL
LLATKAGTLILHLGMSGNLRISDSGQPVLKHDHADFIFTDGTILRFNDQRRFGAILWTSE
SVEQHALLAALGPEPLSEAFNAEFLLKRCQNRRIPIKSLIMDSHIVVGVGNIYASESLFL
AGLHPTRPAEDIDLADCQRLCDAIKTVLLWAIEQGGTTLRDFVNAQGKPGYFQQSLSVYG
RAGQACSQCAEPIQQVKIGQRASYFCGNCQS
NT seq 816 nt   +upstreamnt  +downstreamnt
atgccggaactgcccgaagtcgaaaccagccggcgcggcattacgccgcacgtcctggga
aaaacctttaaagacgtcatcatccgccaaccgcaattgcgctggcctgtgccggaaggc
ttaaacagcatcctgccagggttacatctggataagatcgaacgacgcggcaaatatttg
ctgcttgccacaaaagccggcaccttaatactgcatctgggcatgtcgggtaatctgcgc
attagcgattcggggcaaccggttcttaaacacgatcacgcggatttcattttcaccgac
ggcaccatcctgcgctttaacgaccaacgccggttcggggctattttgtggacatcggaa
tccgtagagcagcatgccctattggccgccttgggacccgaaccgctttccgaagcattc
aatgccgagttcttgctgaagcgatgtcaaaatcgccggatacctattaaaagcctgatt
atggatagccacatcgtggtgggggtgggtaatatctatgccagcgaatccttgtttctg
gccggcctgcaccccacccggcccgcggaagatatcgacttagccgattgccaacgtcta
tgcgacgcgataaaaaccgtgttgctttgggcgatcgagcaaggcggcaccaccttgcgc
gactttgtcaacgcgcaaggcaaacccggttattttcaacaatcgctatcggtatacggc
cgtgccggccaagcgtgctcgcaatgcgccgaacccatccagcaagtcaaaatcggccag
cgcgccagctatttctgcggtaactgccaatcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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