KEGG   Mus musculus (house mouse): 219140
Entry
219140            CDS       T01002                                 
Symbol
Spata13, ESTM11, asef2, mFLJ00298
Name
(RefSeq) spermatogenesis associated 13
  KO
K05769  Rho guanine nucleotide exchange factor 4/29
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    219140 (Spata13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    219140 (Spata13)
Membrane trafficking [BR:mmu04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    219140 (Spata13)
SSDB
Motif
Pfam: RhoGEF SOS1_NGEF_PH SH3_1 PH SH3_9 SH3_2 RHG20_PH Myosin_TH1
Other DBs
NCBI-GeneID: 219140
NCBI-ProteinID: NP_001297523
MGI: 104838
Ensembl: ENSMUSG00000021990
UniProt: Q5DU57 E0CYU0
Position
14:60722617..61002005
AA seq 574 aa
MVARGEIARFWSLESLHMVSSDGGAESSALVDDNGSEEDFSYEELCQANPRYLQPGGEQL
AINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWWGRNEDKEAWFPA
SFVRLRVNQEELPENCSSSHGEEQDEDTSKARHKHPESQQQMRTNVIQEIMNTERVYIKH
LKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIG
SCFLEHQEGFAIYSEYCNNHPGACVELSNLMKHSKYRHFFEACRLLQQMIDIALDGFLLT
PVQKICKYPLQLAELLKYTTQEHGDYNNIKAAYEAMKNVACLINERKRKLESIDKIARWQ
VSIVGWEGLDILDRSSELIHSGELTKITRQGKSQQRIFFLFDHQLVSCKKDLLRRDMLYY
KGRMDMDEVELVDVEDGRDKDWSLSLRNAFKLVSKATDEVHLFCARKQEDKARWLQAYAD
ERRRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYNSCPVAPPHQSLPPLHQRHITV
PTSIPQQQVFALAEPKRKPSIFWHTFHKLTPFRK
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggtagctagaggagaaatagcaagattttggagtctggaaagccttcacatggtctct
tcagatggaggtgcggagtcttcggccttagtggatgataatggtagtgaggaagacttc
agctatgaggagctctgccaggccaaccctcggtacctgcagccaggaggggaacagctg
gccatcaatgagctcatcagcgatggcagcgtggtctgtgcagaagcactgtgggaccat
gtgaccatggacgaccaggagctgggcttcaaggctggggatgtcatccaagttctggaa
gcttctaacaaggactggtggtggggccggaatgaagacaaagaggcctggttccctgca
agctttgttaggcttcgagtcaatcaggaggagctgcccgagaactgcagcagctcccat
ggggaagagcaggatgaggacaccagcaaagcccgccacaagcacccagagagccagcag
cagatgcggaccaacgtcatccaggagataatgaacaccgagcgagtgtatatcaagcac
ctgaaggacatctgcgagggctatatccgacagtgtcgtaagcacacgggaatgttcacc
gttgcgcagctagccactatttttggaaacattgaagacatttacaaattccaaagaaag
tttctgaaagaccttgagaaacagtacaacaaagaggaacctcacttgagtgaaatagga
tcctgctttcttgagcaccaagagggcttcgccatctactctgagtactgcaacaaccac
ccaggcgcctgtgtggagctgtccaacctcatgaaacacagcaagtaccggcacttcttc
gaggcctgccgcctgctccagcagatgatcgacatcgccctggacggcttcctcctcacg
cctgtgcagaagatctgcaaatacccgctgcagctggctgagctgctcaagtacaccaca
caggagcacggcgattacaacaatataaaggcagcctatgaagccatgaagaacgtggcc
tgcttgatcaatgaacgcaagcgcaagctggagagcatcgacaagatcgcccgctggcag
gtgtccatcgtaggctgggagggcctggacattctagaccgaagctctgagttgattcat
tccggagagctgaccaaaatcaccaggcagggcaagagccagcaacgcatcttcttcctt
ttcgaccaccagctggtgtcctgcaagaaggacctgctgcgcagggacatgctatactac
aagggccgcatggacatggacgaggtagagcttgtggacgtggaggatgggcgggacaaa
gactggagcctcagcctgcggaatgccttcaagctggtcagcaaagccacggacgaggtc
catctgttctgcgccagaaagcaagaagacaaggccaggtggctgcaggcctatgcggac
gagaggcggcgggtgcaggaggaccagcagatgggtatggaaatcccagaaaatcagaag
aaactcgccatgttgaacgctcagaaggcaggacatgggaaatctaaaggctacaacagc
tgtcccgtggccccaccccaccagagcctgccgccccttcaccagcgccacatcactgtg
cccaccagcatcccgcagcagcaggtctttgccttggctgagcccaagaggaagccatcg
atattctggcacactttccacaaactcacccccttccggaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (21)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (18)   
DNA sequence (60)   
   RefSeq(nuc) (18)   
   GenBank (21)   
   EMBL (21)   
Protein domain (8)   
   Pfam (8)   
All databases (104)   

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