KEGG   Mus musculus (house mouse): 100929
Entry
100929            CDS       T01002                                 
Symbol
Tyw1, Rsafd1
Name
(RefSeq) tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
  KO
K15449  tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmu03016]
    100929 (Tyw1)
Enzymes [BR:mmu01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.44  tRNA 4-demethylwyosine synthase (AdoMet-dependent)
     100929 (Tyw1)
Transfer RNA biogenesis [BR:mmu03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    100929 (Tyw1)
SSDB
Motif
Pfam: Flavodoxin_1 Wyosine_form Radical_SAM Hydrolase
Other DBs
NCBI-GeneID: 100929
NCBI-ProteinID: NP_001015876
MGI: 2141161
Ensembl: ENSMUSG00000056310
UniProt: Q8BJM7
Position
5:130284460..130370408
AA seq 721 aa
MGPLDVWDLSPLLSLWMNRFYIYMGCALGLTLCICVQIIKKQVTRSQEKRVPGAPDSSLS
PQKKQTHVSGVKIFYGSQTGTAKGFAVVLAKAVTSLDLPVAIINLKEYDPDDSLIGEITS
KTVCAFLVATYTDGCPTESAEWFCKWLEESANDFRFGKTYLKGLRYAVFGLGDSAYRSHF
NKVSTNVDKWLWMLGAQRVLTRGEGDCNAVQSKHGSIEADFTAWKTKFISRLQALQRGEK
KACGGNCKRGKCESAQHGPGEARPHPQGELHPGDAEEEEPCESSSEDELGTQDYQSLTSV
VDVEDLGNIMNPVKREKREKSHQDGKAAMQRNPEKTEDGEGRAMITPALREALTKQGYQL
IGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPV
GTEWRWKMDQPELILKEAIENHQNMIKQFKGVPGLKAERFEEGMEVKHCALSLVGEPIMY
PEINRLLKLLHQHGISSFLVTNAQFPEEIRKLTPVTQLYVSVDASTRDGLKKIDRPLFKD
FWQRFLDSLKALSAKQQRTVYRLTLVKCWNVDELQAYAELVSLGNPDFIEVKGVTYCGES
AASSLTMANVPWHEEVVRFVRELVDLLPDYEVACEHEHSNCLLIGHKKFKIDGEWWTWIN
YSRFQELVLQYEESGGSKTFSSRDYMARTPQWALFGARERGFDPKDTRYQRKNKTKDISG
C
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgggtcctctggatgtgtgggacttgtcgcctttgctgtcactgtggatgaacaggttc
tacatatatatgggctgtgccctgggccttaccctttgcatctgtgtccagatcatcaag
aagcaggtcactcgttcccaggagaaacgtgtcccaggagctcctgatagctccctctcc
cctcagaagaagcagacacacgtttctggagtgaagattttttacggatctcagacgggc
actgccaagggatttgcagtggttcttgccaaagctgtcacctctctggacctgcctgtg
gccattattaatctgaaggaatatgatccagatgacagtctgataggagagatcactagt
aaaaccgtctgtgccttcctggtcgctacgtacacggacggctgccctacagagagtgca
gagtggttctgcaagtggttagaggaatcagctaatgatttccgctttggcaaaacttac
ctgaagggacttcgctatgcagtgtttggcctgggagactctgcctaccggagccacttc
aacaaggtcagcacgaacgttgacaaatggctctggatgctcggtgcccagcgggtgctg
acccgaggggaaggcgactgcaatgcagttcagagcaaacatggcagcatcgaggccgac
ttcacagcctggaagaccaagttcatctcccggctgcaggccctgcagagaggggagaaa
aaggcttgtggcgggaactgcaagagagggaagtgtgagtcggcccagcatggcccagga
gaggcgcggcctcacccgcaaggcgaattgcatcctggggatgctgaggaggaagagccc
tgtgagagcagcagcgaggacgagctcgggacccaggattatcagagcctgacttctgtg
gtggatgttgaggacctgggcaacatcatgaaccccgtgaagagggaaaagagagaaaag
tctcatcaggacgggaaagctgccatgcagaggaacccagagaagactgaggacggcgaa
ggaagagctatgataacacctgctctgcgggaagccctgactaaacaagggtaccagctg
attggcagccactctggtgtgaagctttgcaggtggacaaagtcgatgctgcgggggaga
ggaggttgctacaaacacacattctacggcattgagagccaccgctgcatggaagccacc
ccaagcttggcgtgtgcgaataaatgtgtcttctgctggcggcaccataccaatcctgtg
ggcactgagtggcggtggaagatggaccagccagaattgatcttgaaggaagccattgag
aaccatcagaacatgattaaacagttcaaaggcgtgccaggcctcaaggcggagcgcttt
gaagaggggatggaggtcaagcactgtgcgctgtcactcgtgggtgagccgatcatgtac
ccagaaatcaacaggcttttgaagctgctccaccagcacggcatctccagcttccttgtc
accaatgcgcagttccctgaggagatcaggaagctcacaccagttactcagctctacgtg
agcgtggacgccagcaccagagacggcctgaagaagatcgaccgcccgctcttcaaggat
ttctggcagcgcttcctagacagtttgaaagccttatctgcaaagcaacaacgaacggtc
tacagactgacgcttgtgaagtgttggaacgtggatgaactccaggcctacgctgagctg
gtgtccttggggaaccccgacttcatcgaggtcaagggtgtgacctactgtggtgagagt
gcagccagcagcctcaccatggccaatgtcccttggcacgaggaagtggttcggtttgtc
cgtgagctggtcgatctgcttcccgactatgaagttgcgtgtgaacacgagcactccaac
tgcctcctgatcggacacaagaagtttaagatcgatggagaatggtggacatggatcaat
tacagccgcttccaagagctcgttctgcagtacgaagagagtggaggctccaagacgttc
agctcgagggattacatggccagaaccccacagtgggcactgtttggtgccagggaaaga
ggctttgatcccaaggacacgagataccagaggaagaacaaaacgaaggacatttccgga
tgttga

  All links  
Gene (21)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (33)   
   RefSeq(nuc) (13)   
   GenBank (10)   
   EMBL (10)   
Protein domain (4)   
   Pfam (4)   
All databases (70)   

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