KEGG   Mus musculus (house mouse): 104082
Entry
104082            CDS       T01002                                 
Symbol
Wdr7, TRAG, mKIAA0541
Name
(RefSeq) WD repeat domain 7
  KO
K24738  rabconnectin-3b
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04142  Lysosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    104082 (Wdr7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    104082 (Wdr7)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    104082 (Wdr7)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Ge1_WD40
Other DBs
NCBI-GeneID: 104082
NCBI-ProteinID: NP_001014981
MGI: 1860197
Ensembl: ENSMUSG00000040560
UniProt: Q920I9
Position
18:63841731..64122831
AA seq 1489 aa
MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDVSVELEVNPRALL
FGHTASITCLSKACASGDKRYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQQEGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSQRTQEDTVVAL
SVTGILKVWIVTSEMSGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDQKDKELVICPPVTRFFYGCKEYLHKLLIQGDSSGRLNIWNIAD
IAEKQEADEGLKMTTCISLQEAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCTDGSVYVWQMDTGALDRCAMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEARRQSREDSDPEY
RASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAAGKLLHAKAEVGRKLPAAEGVGKGTYTVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPDLSKARDSPPPSSNIVQGQIKQAAAPVVSARSD
ADHSGSDSASPALPTCFLVNEGWSQLAAMHCVMLPDLLGLERFRPPLLEMLARRWQDRCL
EVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDAS
GPEAKVQEEEHDLVDDDITAGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEI
EPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTYLLLQPPSPKLPPHSTIRRTA
TDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSL
IATARPPAFITTIAKEVHRHTALAANTQSQQSIHTTTLARAKGEILRVIEILIEKMPTDV
VDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYD
IRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQL
RCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4470 nt   +upstreamnt  +downstreamnt
atggcaggaaacagcctagttctgcccattgttctttggggccgcaaagcacccacacat
tgcatttcgtcaatactgttgacagatgatgggggcacaattgtaactggatgccacgat
ggacaaatatgtctctgggatgtttcggtagaactagaagttaatccccgagcactgtta
tttggccacacagcatccatcacttgtttgtcaaaagcctgcgcttctggggacaagcgg
tacactgtgagcgcgtctgcaaacggagagatgtgcctctgggatgtgaacgatggcaga
tgtattgaatttaccaagttagcctgcacacacactggcatacagttctaccagttctct
gttgggaaccagcaagagggcaggctcctctgccatggacattaccctgaaatcctcgtt
gtggatgccaccagccttgaggtgttgtattccttggtatcgaagatctctccagactgg
atcagctccatgagcatcatccgctctcagcggacacaagaggacactgtggtggcgctc
tctgtgacaggtattctgaaggtgtggattgtcacctctgaaatgagtggaatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttattgtcagaattgccaaagcatc
tctttttgtgcattcacacagaggtcacttttggtcgtatgctccaaatactggagggtg
tttgatgctggcgactactctctgttgtgctcaggtcctagtgaaaatggacagacatgg
actggaggggactttgtgtctgcagacaaagtcatcatctggacagaaaatgggcagagt
tacatctacaaactccctgccagttgccttccagctagtgattcattccgcagcgacgtg
gggaaagcagtggaaaatttgatccctcctgtgcagcatagcctcttggatcagaaagat
aaagagttggtaatttgtcctcctgttactcggtttttctacggatgcaaggaatatttg
cataagctactaattcagggcgattcttctggaaggttaaatatctggaacatagcagac
atagcagagaaacaggaagccgatgaagggctaaagatgacaacttgtattagcttgcaa
gaggcatttgacaagctgaagccttgccctgctggaattatcgatcagctaagtgtgatt
cccaacagcaacgaacctcttaaagtaactgcgagtgtctacataccagcacacgggcga
cttgtttgtggccgggaagatggaagcatcattattgtgcctgccacccagacggccata
gttcagctattgcaaggagaacacatgctcagaagaggttggccccctcacagaaccctc
cgtggccatcggaacaaagtcacgtgcctgctgtatccccatcaggtctcagctcggtat
gaccaaagatacctgatatctggaggtgtggatttttccgtcataatttgggacatattt
tctggagaaatgaaacatatcttctgtgttcatggtggtgagatcacacaacttctggtc
cccccggaaaactgtagtgcaagagttcaacactgcatctgttccgtagccagtgaccac
tctgtaggcctcctaagtctgcgagagaaaaaatgcatcatgttggcgtctcgccacctc
tttcctattcaggtgatcaagtggaggccttccgacgactacctggtggtgggatgcaca
gacggctctgtgtatgtctggcagatggacactggtgcgctggatcgttgtgcaatggga
atcacagcagtggagatactgaacgcttgtgacgaagccgttcctgccgctgtagactct
cttagtcatccagcagtcaacctgaaacaagccatgacaagacggagtctcgccgccctt
aaaaatatggcccaccataagctgcaaacccttgcaacgaaccttttggcttctgaggcc
tctgacaagggtaatttacctaaatattcccataactccctgatggttcaagcaataaag
acaaacctaacagacccggatatccatgtgcttttctttgatgtggaagctttgattatt
caactcctgactgaagaagcctctaggccgaatactgcacttatttccccagagaatctg
cagaaagcatctggcagttcagacaaagggggctctttcctaactgggaagcgagcagcg
gttcttttccagcaagtgaaagaaactatcaaagagaacataaaggaacaccttctggat
gaggaggaggacgaggaggaggcgaggaggcagagcagggaggatagtgaccctgagtac
cgggccagcaagtccaagccactgaccctactagaatacaaccttactatggataccgca
aaattattcatgtcctgtctccacgcctggggcttgaatgaagttctggatgaagtttgt
ctcgatcgcctcggaatgctgaaaccgcactgcacggtgtcctttggtctcctatcgaga
ggaggtcatatgtcgctgatgcttcccggttataatcaggctgctggaaaactgctgcat
gcgaaagcagaagtaggaaggaagctgccagcagcggagggcgtaggcaagggaacctac
acagtgtctcgagcggtcaccactcagcatctgttgtccatcatatccctggcgaatact
ttaatgagtatgaccaatgcaactttcattggcgatcacatgaagaagggccccaccagg
ccgcctagacctggcaccccagacctctctaaggcgagggattcccctccaccctccagt
aacattgtgcaaggacagattaaacaagccgctgcgcctgtcgtttctgctcggtctgac
gctgatcactctggctctgactctgcctctcctgctttacctacctgtttcttagtaaat
gaaggctggagccagttagccgccatgcactgtgttatgttgcctgacctgctggggctg
gagagattcaggcctcctctcctggagatgctagctcgaagatggcaggaccgatgcttg
gaggtgagagaggctgcacaggccctgcttctagctgagctgagaaggattgagcaggca
ggacggaaggagacgatcgacacctgggctccttacttacctcagtatatggaccatgtc
atatcacctggcgtcacggcggaagccatgcagactatggcagctgctccagatgcctcg
ggcccagaagccaaagtccaggaagaagagcatgacctggtggatgatgacatcactgca
ggttgcttgtcaagtgtcccacagatgaaaaaaatctccacgtcttacgaagaaagaagg
aagcaggccacggctattgttctcctgggagtgataggggcagagtttggagctgaaatt
gaaccgccgaagctgctgaccaggcctcgaagctccagtcaaatccctgaaggctttggc
ttgaccagcggaggctccaactactccctggccagacacacgtgcaaggcactgacatat
cttctgctacagccaccaagtcccaagctccctcctcatagcaccatccggagaactgcc
actgacctgattgggcgagggttcactgtatgggagccctacatggatgtgtccgctgtc
ctgatggggctgctggagctctgtgcagacgctgagaaacaacttgccaacatcacaatg
gggctgcctctgagccctgcagctgactctgcccgctccgcaaggcacgccctgtctctc
atcgccacagccagaccacccgccttcatcaccaccatagctaaggaggtccacagacac
acggcccttgcagcgaacacccagtcccagcagagtatacacaccaccaccctggcgagg
gctaaaggcgaaatcctgagagtcattgaaattctcattgaaaagatgcccacggatgtg
gtggatcttcttgtggaggtgatggatatcatcatgtactgcctggaaggatctttagtg
aaaaagaagggtcttcaggagtgttttccagctatctgcaggttctacatggtcagctat
tatgagcgcagtcacagaatcgcagttggagcacgccatggctcagtagccctgtatgac
atccggactggaaaatgtcagacaatccatgggcacaagggaccaatcacggcggtgtcc
tttgctcctgatggccgttaccttgccacctactcgaacaccgacagccacatttccttc
tggcagatgaacacctcactcctgggaagcattggaatgctgaactcagctcctcagctg
cgctgcatcaagacctaccaggtccctccagtgcagccagcatcccctggctcccacaac
gcccttaagttggcccggctcatctggacttccaaccggaatgttatcctcatggcccat
gatgggaaggaacaccgcttcatggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (25)   
   RefSeq(nuc) (3)   
   GenBank (11)   
   EMBL (11)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

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