KEGG   Mus musculus (house mouse): 108829
Entry
108829            CDS       T01002                                 
Symbol
Jmjd1c, 5430433L24Rik, D630035I23Rik, Jmjdic, TRIP8
Name
(RefSeq) jumonji domain containing 1C
  KO
K11449  jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    108829 (Jmjd1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    108829 (Jmjd1c)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108829 (Jmjd1c)
SSDB
Motif
Pfam: Tudor_KDM3B JmjC FYVE zf-C5HC2
Other DBs
NCBI-GeneID: 108829
NCBI-ProteinID: NP_001229325
MGI: 1918614
Ensembl: ENSMUSG00000037876
UniProt: Q69ZK6
Position
10:66932189..67092105
AA seq 2350 aa
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRASQNISTVHGHYTRAQANSPRPAMNSQAAVPKQNTHQ
QQQQRSIRPNKRKGSDSSIPDEEKMKEDKYDCVSRGENPKGKNKHVVTKRRKPEEAEKRL
SMKRLRTDNASDASESSDAESSSKRVTETSSSEPMPEYEPKNKVTSKVNGEEGQSQAAEE
AGEETLIDTRPPWDQMQEDKNHNEGEKPKSTDSHLQDKMTLRSSEQATVADHNSNDSVLQ
ECNVENQRTVELLPKDRLVSRTPTPKCVTDIKNDTHSERAAQENLNTFGLQTPENMDPNV
SDSKHSNAKYLETAKQDCDQSWVSDVVKVDLTQSSVTNAPSGSDKRDTEKERNHYVSYMS
SLSAVSVTEDQLHKRSPPPETIKAKLTTSVDTQKAKSSSSPEVVKPKITHSPDSVKSKAA
YGNSQAVGERRLANKIEHELSRGSFHPVPTRGSALETTKSPLIIDKNEHFTVYRDPALIG
SETGANHISPFLSQHPFSLHSSSHRTCLNPGTHHPALTPGPHLLAGSTSQTPLPTINTHP
LTSGPHHPVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQS
PHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAEASLRRNSP
SPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPHKITVHSSPPLTKTLADHHKEELERK
AFMEPLRSNASTSVKGDLDLNRSQAGKDCHLHRHFVGPRPPQETGERLNKYKEEHRRILQ
ESIDVAPFTTKIKGHEVERENYSRVVPSSSSPKSHAIKQDKDVDRSVSEIYKMKHSVPQS
LPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQNNNLSATANPQTHSFISSLSKPPPL
IKHQPESESLVGKIPDHLPHQSASHSVTTFRSDCRSPTHLTVSSTNALRSMPALHRAPVF
HPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDSQSNFKNSSD
QSLTEMWRSNNNLNREKAEWPVEKSSGKSQAAVASVIVRPPSSTKVDSVPSVPLASKDRV
CERSSSGANKTDYLKPEAGETGRIILPNVNLESAHVKSEKNFEAVSQGNVPVSVMSAVNV
VSTTKADVFTSAATTTSVSSLSSAETSYSLSNTISASTPFECTSSKSVVSQAVAQAKDCT
VSTAVPGTLACSKTGSAVQPGSGFSGTTDFIHLKKHKAALAAAQFKNSSVSEAELNTVRN
QTVAASLPLDSTMTCTASNKAISVGNGPAAQSSQPNYHTKLKKAWLTRHSEEDKNTNKME
NSGNSVSEIIKPCSVNLIASTSNDIENRADGRVAVDKYGRDEKVSRRKAKRTYESGSESG
DSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEVEEDSKPNGVLSRSAKDKSKLKLQNS
NSAGVPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEESTHSP
VFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDEVDVETSKYILDII
GDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNVHWVCRKCGFVACL
DCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMLTQIIPGSVLTDLLDAMHILREKYGI
KSHCHCTNRQNLQGGNVPTMNGVSQVLQNVLHHSNKTSVSLPESQQQNSPQKSQTNGNSS
PGSASTDSRLTPPESQSPLHWLADLAEQKSREEKQENKEFTLEREIKEDGDQDASDSPNG
STSPPASQSNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTSSGKGGRTMPNILD
DIIASVVENKIPPNKTSKINIKSEPNEEPKESSLPATDESNKSYRDIPHSWICDQHILWL
KDYKNSNNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADLLNCKDSIV
SNANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEY
CNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVYVG
IAKGNGVLSKAGILKKFEEEELDDVLRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKIS
KEQGLEVLPEHDPIRDQSWYVNRKLRQRLLEEYGVRACTLIQFLGDAIVLPAGTLHQVQN
FHSCVQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRALKMH
EDEVEDMEDT
NT seq 7053 nt   +upstreamnt  +downstreamnt
atgcaaggtccttattcattaaatggatacagagtgagagtctatagacaagattctgcc
acccagtggtttactggcataattactcatcatgatctcttcacccgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgtcgttcactctttgttaaaaggtgaaaatattggcattacatcacggcga
aggtctcgtgccagtcaaaatatcagcactgttcacggtcattatacacgtgctcaagca
aatagtcccagaccagcaatgaactctcaagctgctgtaccaaaacagaacacacaccag
caacagcaacaaagaagtattcgtccaaataagaggaagggttcagatagcagcataccc
gatgaagagaagatgaaggaagataaatatgattgtgtatcacgaggagaaaatcctaaa
ggtaagaacaagcacgtggtgacaaaacggcggaaacctgaggaggccgagaagaggctg
agcatgaaaaggctccggacagacaatgcctctgacgcctccgagagcagtgacgcagag
agctccagcaagagagtgactgagacttcctcctctgaaccaatgccagagtatgaaccg
aaaaataaagtcacctcaaaggtaaatggagaggagggacagtcccaggctgctgaagag
gcaggagaagagaccctgatagatactcggcctccctgggaccagatgcaggaagataaa
aaccacaacgaaggggagaagcccaagtccacggacagccaccttcaagacaaaatgact
ctccgttcatctgagcaagccacagttgctgaccacaattctaatgattcagtccttcaa
gaatgcaatgtggaaaaccaacgcacagtggaattattaccaaaggacaggttagtgtcc
agaacaccgacacccaaatgtgttacggatatcaagaacgacactcattctgagagggcg
gctcaggaaaatttaaatacttttggcctccagacacctgagaacatggatccaaatgtt
agtgattccaaacattcaaatgctaaatacctagaaacagcaaagcaagattgtgaccag
agctgggtcagtgatgtagtgaaagtggatttaactcagtcaagtgttacaaatgctcct
tcaggaagtgataagcgcgatacggagaaagagagaaatcactatgtctcatacatgtct
tcattaagtgcagtttctgtcacagaggatcagctacataaacgaagtccacccccagaa
actataaaagctaaactaactacttcagtagatacccagaaggcaaaatccagttcttca
cctgaagttgttaaacccaagatcactcattctcctgattctgtgaagtctaaagctgct
tatgggaacagtcaagctgttggtgagcgaaggctggcaaataaaatagagcatgagtta
tccagaggtagtttccatccagttcctactcgaggcagtgctttggaaactacaaagagc
cctcttatcattgataaaaacgagcacttcacagtctatagggatcctgctcttattgga
tcagaaacaggagctaatcacatttcaccttttttgagccagcatcctttttctcttcat
tcctcatcccatagaacctgtttaaacccaggtacccatcaccctgccttaacgccagga
ccccacttactagctgggtcaactagtcaaactccattacctaccattaacactcaccct
ctcactagtggtccacaccatcctgtccatcaccctcatttgcttcccactgtgttacct
ggagtgcctactgcctctttactcggtggccacccacgtctagagagtgctcatgcaagc
agcttgagccatttagcactagcacaccagcagcagcaacagttgttacagcaccagtca
cctcatcttcttggacaagcccatccttccgcttcatataatcagcttggactttatcca
attatttggcaatatccgaatggaacacatgcatactcaggacttggtctcccttcttct
aagtgggttcacccagaaaatgcagttaatgctgaagcttcattaaggaggaattctccc
agtccttggctacatcaacccactcctgtgacctcagcggatggtattggattacttagt
cacattcctgtcagaccttccagtgcagagcctcatcgacctcacaagattacagtgcat
tccagtcccccactgacaaagacattagcagatcaccacaaagaagaattggagaggaaa
gcttttatggaaccattacggtctaatgcatccacatcagtaaaaggtgacctggatctt
aataggtcacaggcaggaaaagattgtcacttgcataggcattttgtgggtccaaggcca
ccccaggagactggagagagactgaacaaatacaaggaggaacatcgtcggattcttcag
gagagtattgatgtggctccatttacaaccaaaatcaagggtcatgaggttgaaagagag
aattactccagagtagtaccatcatcttctagtcctaaaagccatgctatcaaacaagat
aaagacgtagaccgctccgtgtcagagatttataagatgaagcactcagtgcctcagagt
ttgccccagagtaactacttcactactttatctaatagtgtggtcaatgagccaccaaga
tcctacccatccaaagaagtttccaacatttacactgagaaacaaaataataacctttct
gcaacagccaatcctcaaactcattcttttatatcatctctttcgaagcctccacctttg
attaaacaccaaccagaaagtgaaagtttagtgggcaagataccagaccatcttccccat
cagagtgcatctcactcagtaacaacgttcagaagtgattgtcggagccctacccatctg
actgtttcttctactaatgcactccgcagcatgcctgctctgcacagggcaccagtattc
catccaccaatccaccacagtttggaaagaaaggaaagcagctacagtagcctttcccct
ccaacactgacaccggtgatgccagtaaatgctggtggcaaagttcaagaatctcagaag
cctccaactctaattcctgagccaaaagactctcagtcaaattttaagaattcttctgat
cagagtctaacggaaatgtggagatctaataacaacctcaacagagagaaagctgagtgg
cccgtggaaaagagtagtggaaagtcccaggctgctgtggcatctgtcattgttcgtcca
ccttctagtacaaaagttgatagtgtgccatctgtaccattagcttccaaagatcgagtt
tgtgaaagatcttcatctggggcaaataaaacagattacctcaaaccagaagccggagag
actggaagaattattctaccaaatgtgaatttagaaagtgctcatgtgaaatctgaaaaa
aactttgaagctgtctcccagggcaacgttcctgtttcagtcatgtctgctgtaaatgta
gtctctactaccaaagcagatgtgttcacatctgctgccactaccaccagtgtctccagc
ttgagtagtgcagaaacaagttattctttatcaaataccatttcggcctctacacccttc
gaatgtacttcttcaaaaagtgttgttagtcaggcagtggcgcaagcaaaggactgcaca
gtcagcaccgcggttccaggcactctggcctgtagtaagacaggaagtgctgttcagccc
ggctctggcttctcaggcacaactgattttattcatttaaaaaagcacaaggcagcgttg
gctgcagctcagtttaaaaatagtagtgtcagtgaggctgaacttaatactgtgagaaat
cagacagtggcagcctctcttcccctggatagcaccatgacctgcactgcaagtaacaaa
gcaatctctgtaggaaatgggccagcagcccagtccagtcagcccaactaccacactaaa
ctgaagaaggcctggctcaccagacattcagaagaagataaaaatactaataaaatggaa
aattcagggaattctgtatccgaaattattaagccatgttctgtcaacttaatagcctct
acatctaatgatatagaaaatcgtgcagatggcagagtcgctgtagataaatatggaaga
gatgagaaagtcagcaggagaaaagccaaaagaacttacgaatctggctctgaaagtgga
gactcagatgagagcgaaagcaagtcggagcagaggactaaacggcagccgaagccaact
tataaaaagaagcagaacgacctgcagaagaggaaaggcgaggtcgaagaggactcgaag
cctaatggagttctcagcaggagcgccaaggacaaaagtaaactgaagttgcagaacagt
aatagcgctggcgttcctcgttccgtgctgaaagactggcggaaggtcaagaagctgaag
caaactggagaatcatttctgcaggatgactcctgctgtgagataggtcccaacttacag
aagtgccgagagtgcagacttatccggagtaagaagggggaagaatcaactcactcaccg
gtgttttgtagattttactactttaggagattgtcctttagtaagaatggagtagtcaga
atagatggtttctcttctcctgatcaatacgatgatgaagccatgagtttatggacccat
gaaaattatgaagatgatgaagtagatgttgaaacctctaagtatatcttggacataata
ggtgataagttctgtcagttagtaacgtctgagaaaacagcgttgtcctgggtgaaaaag
gatgccaaaattgcatggaaaagggcagttcgaggtgtccgggagatgtgtgatgcgtgc
gaggccacactgttcaacgtccactgggtttgccgcaagtgtggatttgtggcttgcttg
gactgttacaaggccaaggaaaggaagagttctagagataaagagctgtatgcttggatg
aagtgtgtgaaaggccagccccatgaccataagcatctgatgctgactcagattatccct
ggctctgtgttgacagaccttcttgatgccatgcacattcttagggaaaaatatggtatt
aaatcccattgtcactgtacaaacagacagaatttacaaggtggaaatgttcctacaatg
aatggtgtgtctcaagttctacagaatgttcttcaccacagtaataagacttctgtgtcc
ctgcctgagtctcagcagcagaacagccctcagaaatctcagactaacggcaacagtagc
cctggaagtgcaagtacagacagcaggttgacacctccagagtcccagtcaccgctgcac
tggctagctgatcttgctgagcagaaatccagagaggaaaaacaagaaaacaaagaattt
actcttgaaagggaaatcaaagaagatggagaccaagatgcctctgattctccaaatggc
agcacatcacctccagcatcccagagcaacgaacagggttcaaccctacgtgatttgctg
accacaacagctggcaagcttcgtgtgggctctacagatgctggcattgcctttgcgcca
gtatattcaatgggaacctcaagtggcaaaggtggccggactatgcctaacattcttgat
gacatcattgcttcagttgttgaaaacaaaattccaccaaataaaacctccaagatcaat
ataaaatcagaacctaatgaagaacccaaagaaagcagtctgcctgccacggatgaaagc
aataagtcttatcgtgacataccacattcttggatctgtgaccagcatattttatggctt
aaagattacaagaatagtaataactggaagcttttcaaagagtgctggaaacaaggacag
cctgcagtggtttccggtgtgcataagaaaatgaacattagcttgtggaaggcagaatca
attagtctggattttggagaccaccaagctgatctcctcaactgcaaagacagcattgtt
tccaatgccaacgttaaggagttctgggatggttttgaagaagtgtcaaaacgtcaaaaa
aacaaaggtggagaaacagtagtattaaagttgaaagactgcccatctggggaggacttc
aaggccatgatgccaacaagatatgaagactttttaagatgtctgccattaccagaatat
tgcaacccagaagggaagttcaatttggcctcccatttgccagggttctttgtacgccct
gatctaggacccaggctgtgcagtgcctatggtgttgctgctgctaaggatcatgatata
ggaaccacaaatcttcacattgaagcttctgatgttgtcaatgtcctagtctatgtcggc
atagcaaaaggaaatggcgtcctctcaaaagcaggaatacttaagaaatttgaagaagaa
gaattagatgatgttttaagaaaaagattaaaggattcgagtgaaatccctggtgctcta
tggcatatttatgctggaaaagatgttgacaagataagggaatttcttcaaaagatttca
aaagaacaaggccttgaagttctgccagagcatgatccaatccgggaccaaagctggtat
gtgaatagaaagctccgccagagactgcttgaggaatatggggtgagagcctgcactctg
attcagttccttggtgatgccattgttttgccagcaggaacacttcaccaggtacaaaat
tttcacagctgtgttcaggtgaccgaagactttgtctctccagaacatcttgtacagtcg
tttcacttaacacaggagctgaggcttttgaaggaagaaatcaattacgatgataaactc
caggttaagaatatcttgtatcatgcagtcaaggaaatggtgagagctctgaagatgcat
gaagatgaagtagaggatatggaagacacctaa

  All links  
Gene (49)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (27)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (25)   
DNA sequence (63)   
   RefSeq(nuc) (29)   
   GenBank (17)   
   EMBL (17)   
Protein domain (4)   
   Pfam (4)   
All databases (143)   

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