KEGG   Mus musculus (house mouse): 114896
Entry
114896            CDS       T01002                                 
Symbol
Afg3l1, 1700047G05Rik, 3110061K15Rik
Name
(RefSeq) AFG3-like AAA ATPase 1
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    114896 (Afg3l1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mmu01002]
    114896 (Afg3l1)
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:mmu03110]
    114896 (Afg3l1)
Peptidases and inhibitors [BR:mmu01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   114896 (Afg3l1)
Chaperones and folding catalysts [BR:mmu03110]
 Other chaperones and cochaperones
  AAA proteases
   114896 (Afg3l1)
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 AAA_22 AAA_16 TIP49 AAA_2 RuvB_N AAA_17 AAA_28 nSTAND3 AAA_14 Mg_chelatase AAA_33 IstB_IS21
Other DBs
NCBI-GeneID: 114896
NCBI-ProteinID: NP_473411
MGI: 1928277
Ensembl: ENSMUSG00000031967
UniProt: Q920A7
Position
8:124204601..124230655
AA seq 789 aa
MLLRLVGAAGSRALAWPFSKLWRCGGCAGSGGTVWSSVRACGIALQGHLGRCSQQLALQG
KLTSFSPRLYSKPPRGFEKFFKNKKNRKSASPGNSVPPKKEPKNAGPGGDGGNRGGKGDD
FPWWKRMQKGEFPWDDKDFRSLAVLGAGVAAGFLYFYFRDPGKEITWKHFVQYYLARGLV
DRLEVVNKQFVRVIPVPGTTSERFVWFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTT
ESDGSFLRSLVPTLVLVSILLYAMRRGPMGTGRGGRGGGLFSVGETTAKILKNNIDVRFA
DVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP
FITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQE
NTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFK
VHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQA
IERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQY
LPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGMSE
KLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGR
RLLEKEVLEKADMIELLGPRPFAEKSTYEEFVEGTGSLEEDTSLPEGLKDWNKGREEGGT
ERGLQESPV
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgttactgcggctggtgggggcggcgggcagtcgagccctggcctggcctttctccaag
ctgtggcgatgtggcggatgcgcagggagcggcgggacggtctggagcagcgtgagggcc
tgtggcattgctctgcagggtcatctggggagatgctcgcagcagctggctctgcaggga
aaactgacttcattttccccgaggctgtattcaaaacctcccagagggtttgagaagttt
tttaagaataagaagaacagaaaaagtgcaagcccaggaaattcagtacctccaaaaaaa
gaaccaaaaaatgctggccctggaggagatggaggcaacagaggagggaaaggagatgat
tttccctggtggaaacggatgcaaaagggagaatttccttgggacgacaaggacttccgg
agcctggctgttttgggggctggtgtggctgcgggatttttatatttttatttccgagat
cccggaaaagagatcacctggaaacacttcgtgcagtattacctggccagaggtctggtg
gaccggctagaggttgtgaacaagcagtttgtgcgtgttattcctgttcctgggacgaca
tctgagaggttcgtgtggtttaacattggcagtgttgacacctttgaacggaacctcgag
tctgctcagtgggagctgggcattgagcccaccaaccaggctgcggtggtctacactact
gagagtgatggctcttttcttagaagtcttgtgcccactctggtcctggttagcatcctc
ctatatgctatgaggaggggtccaatggggactggtcgcggtgggcgaggaggaggcctc
ttcagtgttggtgagacaacagccaagatcttaaagaacaacatcgatgtgcggtttgca
gatgtggctggctgtgaagaagccaaactggaaattatggagtttgtgaatttcctgaag
aacccaaagcaatatcaggacttaggagccaaaattccaaagggagcgatgctcactggt
ccacctggtactggcaaaacacttcttgcaaaagcaactgctggggaggccaacgtgccc
ttcatcaccgtgaatgggtcggaattcctggaaatgtttgttggtgttgggccagcacgg
gtccgtgacatgtttgcaatggcccgaaaacacgctccttgtattttattcattgatgag
attgatgcaattggcagaaagcgaggccgtggccacctgggaggccagagtgagcaggaa
aacactttaaaccagatgcttgtggagatggacgggttcaactcttccactaatgtggta
gtgttagccggcaccaatcgccctgatatccttgacccagccctgacacggcctggccgg
tttgaccgtcagatctacatcggtccccctgatatcaaaggcaggtcctctattttcaag
gtccacttgcgtccactcaagctggacggaagcctcagcaaggacgctctttcgaggaag
ctggcagctcttactccaggcttcactggtgctgatatttccaatgtttgcaatgaagca
gcactgattgctgcccgccacctcagcccttctgtccaggagcggcactttgagcaagcc
atcgagagggtcattggaggccttgagaagaagacccaggtcctacaacccagtgaaaag
acaactgtagcctaccacgaggctgggcatgcagtggtgggctggttcttggagcatgca
gaccctctgctgaaggtgtccatcatacctcgaggcaaggggcttggctacgcccagtac
cttccccgcgagcagttcctctacacacgagagcagctcttcgaccgcatgtgtatgatg
ctggggggtagggtagctgagcagctgttctttggtcagatcaccaccggagctcaggac
gacctgaggaaggtcacccagagtgcctatgcccagattgtgcagtttgggatgagtgag
aagctgggccaggtgtcctttgacttccccagacaaggcgaaaccatggtggagaagcca
tacagtgaggctactgcccagctcattgatgaagaggtccggtgcctcgtcaggtctgcc
tataatcggaccctggagctgctcacacagtgccgggagcaggtggagaaggttggcagg
cgtctcctggagaaagaagtgctggagaaagccgacatgatagagctcttgggccctcgg
ccctttgcagagaagtccacctatgaggaatttgtagagggcaccggcagcctagaggag
gacacatcccttcctgaggggctgaaagactggaataaggggcgggaggaaggaggcact
gagcggggcttgcaggagagccctgtgtag

  All links  
Gene (15)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (35)   
   RefSeq(nuc) (3)   
   GenBank (16)   
   EMBL (16)   
Protein domain (17)   
   Pfam (17)   
All databases (71)   

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