KEGG   Mus musculus (mouse): 11816Help
Entry
11816             CDS       T01002                                 

Gene name
Apoe, AI255918, Apo-E
Definition
(RefSeq) apolipoprotein E
  KO
K04524  apolipoprotein E
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04979  Cholesterol metabolism
mmu05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    11816 (Apoe)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    11816 (Apoe)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    11816 (Apoe)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    11816 (Apoe)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   11816 (Apoe)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Haparin
  Others
   11816 (Apoe)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Apolipoprotein DUF883 ApoLp-III GldM_N DUF1690 PIN_8 DUF1664 CAP_N DUF1043 PrkA Phasin OmpH Prominin AKNA DIT1_PvcA DUF1451 Stathmin
Motif
Other DBs
NCBI-GeneID: 11816
NCBI-ProteinID: NP_001292748
MGI: 88057
Ensembl: ENSMUSG00000002985
Vega: OTTMUSG00000038239
UniProt: P08226 Q3TXU4
Structure
PDB: 

Position
7 A3; 7 9.94 cM
AA seq 311 aa AA seqDB search
MKALWAVLLVTLLTGCLAEGEPEVTDQLEWQSNQPWEQALNRFWDYLRWVQTLSDQVQEE
LQSSQVTQELTALMEDTMTEVKAYKKELEEQLGPVAEETRARLGKEVQAAQARLGADMED
LRNRLGQYRNEVHTMLGQSTEEIRARLSTHLRKMRKRLMRDAEDLQKRLAVYKAGAREGA
ERGVSAIRERLGPLVEQGRQRTANLGAGAAQPLRDRAQAFGDRIRGRLEEVGNQARDRLE
EVREHMEEVRSKMEEQTQQIRLQAEIFQARLKGWFEPIVEDMHRQWANLMEKIQASVATN
PIITPVAQENQ
NT seq 936 nt NT seq  +upstreamnt  +downstreamnt
atgaaggctctgtgggccgtgctgttggtcacattgctgacaggatgcctagccgaggga
gagccggaggtgacagatcagctcgagtggcaaagcaaccaaccctgggagcaggccctg
aaccgcttctgggattacctgcgctgggtgcagacgctgtctgaccaggtccaggaagag
ctgcagagctcccaagtcacacaagaactgacggcactgatggaggacactatgacggaa
gtaaaggcttacaaaaaggagctggaggaacagctgggtccagtggcggaggagacacgg
gccaggctgggcaaagaggtgcaggcggcacaggcccgactcggagccgacatggaggat
ctacgcaaccgactcgggcagtaccgcaacgaggtgcacaccatgctgggccagagcaca
gaggagatacgggcgcggctctccacacacctgcgcaagatgcgcaagcgcttgatgcgg
gatgccgaggatctgcagaagcgcctagctgtgtacaaggcaggggcacgcgagggcgcc
gagcgcggtgtgagtgccatccgtgagcgcctggggcctctggtggagcaaggtcgccag
cgcactgccaacctaggcgctggggccgcccagcctctgcgcgatcgcgcccaggctttt
ggtgaccgcatccgagggcggctggaggaagtgggcaaccaggcccgtgaccgcctagag
gaggtgcgtgagcacatggaggaggtgcgctccaagatggaggaacagacccagcaaata
cgcctgcaggcggagatcttccaggcccgcctcaagggctggttcgagccaatagtggaa
gacatgcatcgccagtgggcaaacctgatggagaagatacaggcctctgtggctaccaac
cccatcatcaccccagtggcccaggagaatcaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (55)   
   RefSeq(nuc) (5)   
   GenBank (25)   
   EMBL (25)   
Protein domain (17)   
   Pfam (17)   
All databases (99)   

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