KEGG   Mus musculus (mouse): 11865
Entry
11865             CDS       T01002                                 

Gene name
Arntl, Ar, Arnt3, BMAL1b, Bma, Bmal1, MO, MOP3, bHLHe, bHLHe5, bmal1b'
Definition
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like
  KO
K02296  aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04710  Circadian rhythm
mmu04728  Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09156 Nervous system
   04728 Dopaminergic synapse
    11865 (Arntl)
  09159 Environmental adaptation
   04710 Circadian rhythm
    11865 (Arntl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    11865 (Arntl)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    11865 (Arntl)
SSDB
Motif
Pfam: PAS_11 PAS PAS_3 HLH PAS_9 PAS_4 PAS_2
Other DBs
NCBI-GeneID: 11865
NCBI-ProteinID: NP_031515
MGI: 1096381
Ensembl: ENSMUSG00000055116
Vega: OTTMUSG00000060257
UniProt: Q9WTL8 Q3UHZ2
Structure
PDB: 
4F3L

Position
7 F1; 7 59.17 cM
AA seq 626 aa
MADQRMDISSTISDFMSPGPTDLLSGSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR
LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
DNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAPPHSMDSMLPSGEGGPKRTHPT
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
LNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
AVIMSLLEADAGLGGPVDFSDLPWPL
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggcggaccagagaatggacatttcctcaaccatcagcgacttcatgtctccgggcccc
accgacctactctccggttccctgggcaccagtggtgtggactgcaatcgcaagaggaaa
ggcagtgccactgactaccaagaaagtatggacacagacaaagatgaccctcatggaagg
ttagaatatgcagaacaccaaggaaggatcaagaatgcaagggaggcccacagtcagatt
gaaaagaggcgtcgggacaaaatgaacagtttcattgatgaattggcttctttggtacca
acatgcaatgcaatgtccaggaagttagataaactcaccgtgctaaggatggctgttcag
cacatgaaaactttgagaggtgccaccaacccatacacagaagcaaactacaagccaaca
tttctatcagatgacgaactgaaacacctaattctcagggcagcagatggatttttgttt
gtcgtaggatgtgaccgagggaagatcctctttgtctccgagtctgtcttcaagatcctc
aattatagccagaatgaccttattggccagagcttgtttgactacctgcatccaaaagat
attgccaaagttaaggaacagctatcttcctcggacactgcgccccgggagcgactcatt
gatgccaagactggacttccggttaaaacggatataacccctgggccctcccggctatgc
tctggagcccgccgctctttcttctgtagaatgaagtgcaacaggccttcagtaaaggtg
gaagataaggacttcgcctctacctgttcaaagaaaaaagcagatcgaaaaagcttctgc
acaatccacagcacaggctatttgaaaagctggccacccacgaagatggggctggacgaa
gacaatgagccagacaacgagggctgcaacctcagctgcctcgttgcaatcgggcgcctg
cactcgcacatggttccacaaccagcgaacggggaaatacgggtgaaatctatggagtac
gtttctcgacacgcaatagatgggaaatttgtttttgtagatcagagggcgacagctatt
ttggcgtatctaccacaggaacttctaggtacatcatgttatgagtattttcatcaagac
gacataggacacctcgcagaatgtcacaggcaagttttacagacaagagaaaagatcaca
actaattgctataagtttaagatcaaagatggttcttttatcacgctacgaagtcgatgg
ttcagtttcatgaacccgtggaccaaggaagttgaatacattgtctcaaccaacactgtt
gttttagccaatgtcctggaaggcggggacccaaccttcccgcagctaacagcacccccc
cacagcatggacagcatgctgccctctggagaaggtggcccaaagaggactcatcccact
gtcccaggcattccagggggaaccagagccggagcaggaaaaataggtcgaatgatcgcg
gaggaaatcatggaaatccacaggataagagggtcatcgccttccagctgtggctccagc
ccgctgaacatcacaagtacgcctccccctgatgcctcttctccaggaggcaagaagatt
ctaaatggagggactccagacattccttccactggactattaccagggcaggctcaggag
accccagggtatccctattctgatagttcttctattcttggtgagaacccccacataggc
atcgatatgatagataacgaccaaggatcaagtagtcccagtaacgatgaggcagcaatg
gctgtcatcatgagcctcttggaagcagatgcggggctgggtggccccgttgactttagt
gacttgccatggccgctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (24)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (21)   
DNA sequence (52)   
   RefSeq(nuc) (24)   
   GenBank (14)   
   EMBL (14)   
Protein domain (7)   
   Pfam (7)   
All databases (101)   

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