KEGG   Mus musculus (house mouse): 12057
Entry
12057             CDS       T01002                                 
Symbol
Opn1sw, Bcp
Name
(RefSeq) opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
  KO
K04252  short wavelength-sensitive opsin
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:mmu04030]
    12057 (Opn1sw)
G protein-coupled receptors [BR:mmu04030]
 Rhodopsin family
  Vision
   Opsin
    12057 (Opn1sw)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srv 7tm_4 WBP-1
Other DBs
NCBI-GeneID: 12057
NCBI-ProteinID: NP_031564
MGI: 99438
Ensembl: ENSMUSG00000058831
UniProt: P51491
Position
6:complement(29376670..29380512)
AA seq 346 aa
MSGEDDFYLFQNISSVGPWDGPQYHLAPVWAFRLQAAFMGFVFFVGTPLNAIVLVATLHY
KKLRQPLNYILVNVSLGGFLFCIFSVFTVFIASCHGYFLFGRHVCALEAFLGSVAGLVTG
WSLAFLAFERYVVICKPFGSIRFNSKHALMVVLATWIIGIGVSIPPFFGWSRFIPEGLQC
SCGPDWYTVGTKYRSEYYTWFLFIFCFIIPLSLICFSYSQLLRTLRAVAAQQQESATTQK
AEREVSHMVVVMVGSFCLCYVPYAALAMYMVNNRNHGLDLRLVTIPAFFSKSSCVYNPII
YCFMNKQFRACILEMVCRKPMADESDVSGSQKTEVSTVSSSKVGPH
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtcaggagaggatgacttttacctgtttcagaatatctcttcggtggggccctgggat
gggcctcagtaccaccttgctcctgtctgggccttccgcctccaggcagccttcatggga
tttgtcttctttgtggggaccccactcaatgccatagtgctggtggccacactgcattac
aaaaagttgcgacagcccctcaactatattctggtcaatgtatccctcgggggcttcctc
ttctgcatcttctctgtcttcacagtcttcatcgccagctgtcacggatacttcctcttt
ggtcgccatgtttgtgctctggaggccttcttgggctctgtagcaggtctagtgacagga
tggtcattggctttcctggcttttgaacgctacgttgtcatctgtaaacccttcggcagc
atccgcttcaactccaagcatgcactgatggtggtcctggctacttggattattggtatc
ggggtgtccatcccacccttttttggctggagcaggttcatccctgagggcctgcagtgc
tcctgtggcccagactggtacactgtgggcaccaagtatcgaagcgagtactacacctgg
ttcctcttcatcttctgtttcatcattcctctttccctcatctgcttctcctactcccag
ttgctgaggactctcagagctgtggcagctcagcagcaagagtctgctacgacacaaaag
gctgaacgggaggtgagtcatatggtggtggtgatggtgggatccttctgtctctgctac
gtgccctatgctgccctggccatgtacatggtcaacaatcggaaccacgggctggactta
cggcttgtcaccatccccgccttcttttccaagagctcctgtgtctacaaccccatcatc
tactgcttcatgaataagcagttccgggcttgcattctggagatggtgtgcaggaagccc
atggcagacgaatctgacgtgtctggctctcagaaaacagaagtttctactgtctcttct
agcaaagttggccctcactga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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