KEGG   Mus musculus (mouse): 12827Help
Entry
12827             CDS       T01002                                 

Gene name
Col4a2, Col4a-2
Definition
(RefSeq) collagen, type IV, alpha 2
  KO
K06237  collagen, type IV, alpha
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04926  Relaxin signaling pathway
mmu04933  AGE-RAGE signaling pathway in diabetic complications
mmu04974  Protein digestion and absorption
mmu05146  Amoebiasis
mmu05165  Human papillomavirus infection
mmu05200  Pathways in cancer
mmu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    12827 (Col4a2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    12827 (Col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    12827 (Col4a2)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    12827 (Col4a2)
  09154 Digestive system
   04974 Protein digestion and absorption
    12827 (Col4a2)
 09160 Human Diseases
  09161 Cancers: Overview
   05200 Pathways in cancer
    12827 (Col4a2)
  09162 Cancers: Specific types
   05222 Small cell lung cancer
    12827 (Col4a2)
  09167 Endocrine and metabolic diseases
   04933 AGE-RAGE signaling pathway in diabetic complications
    12827 (Col4a2)
  09172 Infectious diseases: Viral
   05165 Human papillomavirus infection
    12827 (Col4a2)
  09174 Infectious diseases: Parasitic
   05146 Amoebiasis
    12827 (Col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    12827 (Col4a2)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    12827 (Col4a2)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   12827 (Col4a2)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate/Haparin
  Extracellular matrix molecules
   12827 (Col4a2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Collagen C4
Motif
Other DBs
NCBI-GeneID: 12827
NCBI-ProteinID: NP_034062
MGI: 88455
Ensembl: ENSMUSG00000031503
Vega: OTTMUSG00000021317
UniProt: P08122 B2RQQ8
Position
8 A1.1; 8 5.62 cM
AA seq 1707 aa AA seqDB search
MDRVRFKASGPPLRGWLLLATVTVGLLAQSVLGGVKKLDVPCGGRDCSGGCQCYPEKGAR
GQPGAVGPQGYNGPPGLQGFPGLQGRKGDKGERGVPGPTGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSGGFPGLPGPQGPKGQKGEPYALSKEDRD
KYRGEPGEPGLVGYQGPPGRPGPIGQMGPMGAPGRPGPPGPPGPKGQPGNRGLGFYGQKG
EKGDIGQPGPNGIPSDITLVGPTTSTIHPDLYKGEKGDEGEQGIPGVISKGEEGIMGFPG
IRGFPGLDGEKGVVGQKGSRGLDGFQGPSGPRGPKGERGEQGPPGPSVYSPHPSLAKGAR
GDPGFQGAHGEPGSRGEPGEPGTAGPPGPSVGDEDSMRGLPGEMGPKGFSGEPGSPARYL
GPPGADGRPGPQGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGTRGQKGWKGEAGD
CQCGQVIGGLPGLPGPKGFPGVNGELGKKGDQGDPGLHGIPGFPGFKGAPGVAGAPGPKG
IKGDSRTITTKGERGQPGIPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGL
PGVPGTKGFPGDIGPPGQGLPGPKGERGFPGDAGLPGPPGFPGPPGPPGTPGQRDCDTGV
KRPIGGGQQVVVQPGCIEGPTGSPGQPGPPGPTGAKGVRGMPGFPGASGEQGLKGFPGDP
GREGFPGPPGFMGPRGSKGTTGLPGPDGPPGPIGLPGPAGPPGDRGIPGEVLGAQPGTRG
DAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQSGPPGQHGFPG
TPGREGPLGQPGSPGLGGLPGDRGEPGDPGVPGPVGMKGLSGDRGDAGMSGERGHPGSPG
FKGMAGMPGIPGQKGDRGSPGMDGFQGMLGLKGRQGFPGTKGEAGFFGVPGLKGLPGEPG
VKGNRGDRGPPGPPPLILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGVSGFPGL
PGRPGFIKGVKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRGEKGTPGVAGVFGETG
PTGDFGDIGDTVDLPGSPGLKGERGITGIPGLKGFFGEKGAAGDIGFPGITGMAGAQGSP
GLKGQTGFPGLTGLQGPQGEPGRIGIPGDKGDFGWPGVPGLPGFPGIRGISGLHGLPGTK
GFPGSPGVDAHGDPGFPGPTGDRGDRGEANTLPGPVGVPGQKGERGTPGERGPAGSPGLQ
GFPGISPPSNISGSPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKGDEGSSGAAGFPGQK
GWVGDPGPQGQPGVLGLPGEKGPKGEQGFMGNTGPSGAVGDRGPKGPKGDQGFPGAPGSM
GSPGIPGIPQKIAVQPGTLGPQGRRGLPGALGEIGPQGPPGDPGFRGAPGKAGPQGRGGV
SAVPGFRGDQGPMGHQGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCP
VGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSY
WLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDTSIPHCPAGWRSLWIGYSF
LMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQNFQ
STPSADTLKAGLIRTHISRCQVCMKNL
NT seq 5124 nt NT seq  +upstreamnt  +downstreamnt
atggaccgagtgcggttcaaagcgtctggccctcccctgcgagggtggctgctgctagca
actgtgacagtgggactcctggctcagagcgtcttggggggtgtgaagaagttggatgtg
ccctgcggagggagagactgcagtgggggttgccagtgctacccggagaaaggagcaagg
ggtcagccaggggcagtgggcccccaggggtacaatggccccccagggttgcaaggattc
ccaggactacagggccgcaaaggagacaagggcgaacggggagttcctggaccaactgga
ccaaaaggagatgtgggagcgagaggcgtctctggattccccggtgcagatggaattcct
gggcatccagggcaaggcggaccccgaggaaggccaggctacgatggttgcaacggaacc
aggggagacgcgggtccacaggggccctctggatctgggggcttccctggcctccctggg
ccccaaggacccaaggggcagaaaggcgagccttacgcactctctaaagaagaccgtgac
aaataccggggtgaacctggagagcctggcctggttggctaccagggacctcctggccgc
ccagggcccataggacagatgggtcccatgggagcacctggaagaccgggaccaccggga
ccccctggacccaagggacaaccaggcaaccgagggctcggtttttacggacagaagggt
gaaaagggtgacataggacagccaggacccaacgggatcccatctgacatcacacttgtt
gggcccacaacatcaacgatccacccggatctgtacaagggtgaaaaaggagacgaagga
gagcaagggatacccggcgtaatctcaaaaggcgaggaaggcatcatggggttcccagga
atacggggttttcctggccttgatggagaaaaaggagtcgtaggacagaaaggaagcaga
ggcctggatggtttccaaggccccagtggacctcgaggacccaagggagaacggggggaa
caaggacccccaggaccctctgtctactcgccccatccatccctggcaaaaggtgcccga
ggtgacccaggattccaaggtgctcatggggagccaggaagccgaggcgaaccgggagag
cctggaaccgcgggtcctccaggcccatccgtcggagatgaagattcaatgagaggcctt
ccaggggagatgggacccaaaggcttctcaggagaaccagggtcccctgcacgctatctt
ggcccaccaggagcagatggaagaccaggtccccaaggagtccctggacctgcaggccca
cctggaccagatggcttcctgtttggcctgaaaggatcagaagggagagtgggctacccg
ggaccttcaggtttcccaggaacacgagggcagaaaggatggaaaggtgaagctggagac
tgccaatgtggccaggtcatcgggggtcttccgggactgccaggacccaaaggttttccc
ggtgtcaatggggagctcggaaagaaaggcgaccaaggagacccaggcctgcacggtatc
cctgggttcccaggattcaagggagccccgggcgttgctggagctcctggacccaaagga
ataaagggagactctagaacaatcaccaccaaaggggagcgaggacagccaggtatccct
ggtgtacacggaatgaaaggtgatgacggcgtcccaggacgggatgggctggatggattc
cctggcctgcctggccccccgggcgatggcatcaaaggccctccaggggatgcaggtctc
cctggtgtacccggaaccaagggctttccaggagacatcggtcctccaggacagggctta
ccaggtccgaaaggcgagcgtggtttccctggagacgctgggttgcctggacctccgggc
ttccctggtcctccaggtcccccaggaaccccaggacagagagattgtgacacgggtgtg
aaaagacctatcggaggcggccagcaagtggtcgttcagccaggttgcattgaaggcccc
acaggatcacctggccagccaggacccccaggccccacaggtgccaaaggcgtcagagga
atgccaggattcccaggagcttctggagaacaagggctcaagggctttccaggagaccca
ggtcgagaaggcttcccagggcccccagggttcatgggaccccgaggatccaaaggtacc
acaggcctccctggcccagatggacccccaggccccattggacttccaggaccagctgga
ccccctggggacagagggattccaggagaagtgctaggggcccagcctgggacacgagga
gatgctggacttccaggacagcctgggctgaaagggctcccaggagaaacaggagcaccg
ggattcagaggaagccaagggatgcccgggatgccagggcttaaaggtcagccaggcttc
ccaggaccttcgggacagccaggacagtctgggcccccaggacaacatggattcccagga
actcctggccgagaggggcctttggggcagccaggctcccctggccttggaggtttgcct
ggagacaggggcgagcctggtgaccctggtgtccctggccctgtgggcatgaaaggtctg
tctggggacagaggtgacgccggtatgtcaggcgagcgtggtcaccctggaagccctgga
tttaaaggaatggcagggatgcctggtatccctgggcagaaaggtgatcgagggtcgcct
ggaatggacggtttccagggcatgttgggacttaagggaagacagggcttcccagggacc
aaaggagaagctggattttttggagttcctggtttgaagggcctgcctggcgagccaggg
gttaaaggaaaccgaggagaccgggggcccccaggaccacctcctctcatcctgccgggg
atgaaggacatcaagggagaaaagggagatgaaggaccaatgggcctgaaagggtatctg
ggcttaaaaggcatccaaggaatgcccggagtccccggagtgtctggattccctgggcta
cctggaaggcctggcttcatcaaaggagtcaagggagacatcggagtccctggcacacca
ggcttgccgggattccctggggtgtctggccctcctggaattaccgggtttccaggattc
acaggcagccggggcgagaagggtactccaggagtagcaggagtttttggcgagaccggc
cctactggggactttggtgacattggggacactgtggacttaccagggagcccaggcctg
aagggggaacggggcatcacgggaattccaggtctcaagggattctttggagagaaagga
gctgcgggtgacattggatttcctgggataacgggcatggctggagctcagggctctcct
ggacttaaaggacagacaggctttccagggctcacagggctgcaagggccacagggagag
cctggacggatcggaatacccggtgacaagggtgatttcggctggccaggcgtaccaggt
ctaccaggttttcctgggatccggggcatcagcggattgcacggcctgccaggcaccaaa
ggcttccctggatcaccaggtgttgatgctcatggagacccagggttcccaggccccact
ggagacaggggtgaccggggagaggccaacacacttccaggccccgtgggagttccaggg
cagaaaggggagcggggaaccccaggggaacgtggcccagctggaagcccaggacttcag
ggtttccctggtatctctccaccatccaacatctctgggtcacctggtgatgtaggcgca
ccaggaatatttggcttgcaaggctaccaaggccctccaggaccacctgggccaaacgca
cttcctggaatcaaaggagatgaggggagctctggagctgcaggattccctggacagaaa
ggatgggttggggacccagggccccagggccagcctggtgtactcggtcttccgggggag
aaagggcccaagggtgaacaaggattcatgggcaacaccgggccctctggggccgtgggt
gacagaggccccaaaggacccaaaggcgaccaaggattcccaggtgctcctggctctatg
gggtccccaggaattcctggcatcccccagaagattgctgtccagcctggaacgctgggt
ccccagggcaggagaggccttcctggggccctgggagagatagggccgcagggccctcct
ggagatccaggcttccgtggggccccaggcaaggctgggcctcagggcagaggtggcgtg
tctgctgttccagggttccggggagaccaagggcccatgggacaccagggtccagttggc
caggaaggggagccaggccgtccagggagcccaggcctgccagggatgccaggccgcagt
gtgagcatcggctacctcctggtgaagcacagccaaacggaccaggaacccatgtgccct
gtgggcatgaacaagctctggagtgggtacagcctgctatattttgagggccaggagaaa
gcgcacaaccaggacctaggactggcaggctcctgcctggcacgcttcagcaccatgcct
ttcctgtactgcaatccgggtgacgtctgctactatgccagccgcaacgacaagtcctac
tggctctccaccacggcccctctgcccatgatgcccgtggctgaggaggaaatcaagccc
tacatcagccgctgctctgtgtgcgaggctccggccgtggccattgccgtgcacagccag
gatacctctataccccactgcccggctgggtggcggagtttgtggatcggatattcattc
ctcatgcacactgcagccggggatgaaggcggtggccagtcactggtgtcgccgggcagc
tgtctagaggacttccgtgcaacgccatttatcgagtgtaacgggggccgtggtacctgc
cactacttcgctaacaagtacagcttctggctgaccacgatcccagagcagaacttccag
agcacaccatccgctgacacgctcaaggctggcctcatccgcacgcacatcagccgctgc
caagtgtgcatgaagaatctgtga

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