KEGG   Mus musculus (house mouse): 12832
Entry
12832             CDS       T01002                                 
Symbol
Col5a2, 1110014L14Rik
Name
(RefSeq) collagen, type V, alpha 2
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04820  Cytoskeleton in muscle cells
mmu04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    12832 (Col5a2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    12832 (Col5a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    12832 (Col5a2)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   12832 (Col5a2)
SSDB
Motif
Pfam: Collagen COLFI VWC Amnionless TILa
Other DBs
NCBI-GeneID: 12832
NCBI-ProteinID: NP_031763
MGI: 88458
Ensembl: ENSMUSG00000026042
UniProt: Q3U962
Position
1:complement(45413491..45542442)
AA seq 1497 aa
MMANWVGARPLLILSVLLGYCVSIKAQEQENDEYDEEIACTQHGQMYLNRDIWKPSPCQI
CVCDNGAILCDKIECPEVLNCANPITPTGECCPVCPQTGGGDTSFGRGRKGQKGEPGLVP
VVTGIRGRPGPAGPPGSQGPRGDRGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHP
GPDGMSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGVGPAGPPGEP
GEPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNTGEVGFSGSPGARGFPGAPGLPGLKGHR
GHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMP
GKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAV
GTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPK
GEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQ
GERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPP
GSIGIRGQPGSMGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLA
GERGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERGEP
GITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGI
GEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPT
GAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQ
GPPGATGFPGSAGRVGPPGPAGAPGPAGPAGEPGKEGPPGLRGDPGSHGRVGDRGPAGPP
GSPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPT
GATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQ
GAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQK
GHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVR
GSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDENMPDPLPEFTEDQAAPDDTN
KTDPGIHVTLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHPTKQSGEYWIDPNQGSAED
AIKVYCNMETGETCISANPASVPRKTWWASKSPDNKPVWYGLDMNRGSQFTYGDYQSPNT
AITQMTFLRLLSKEASQNLTYICRNTVGYMDDQAKNLKKAVVLKGSNDLEIKGEGNIRFR
YTVLQDTCSKRNGNVGKTIFEYRTQNVARLPIIDVGPVDIGNADQEFGLDIGPVCFM
NT seq 4494 nt   +upstreamnt  +downstreamnt
atgatggcaaactgggtgggagcaagacctctcctcattctttctgttttattagggtac
tgtgtctcaataaaagcccaggaacaagagaatgatgaatatgatgaagaaatagcctgt
actcaacatggacagatgtatttaaatagagacatttggaaaccttctccatgtcagatc
tgtgtctgtgacaatggtgccattctttgtgacaagatagagtgcccagaggtgctcaac
tgtgccaatcctataacacccactggggagtgctgtccggtgtgcccacaaactggaggt
ggagatactagttttggtagaggaagaaagggacaaaaaggagaaccaggattagtgcct
gttgtaacaggtatacgcggtcgtccaggacctgcaggccccccaggatcacaaggacca
agaggggaccgaggccctaaaggaagacctggtcctcgtggtcctcagggaattgatgga
gagccaggtgtgcctggtcagccaggtgctccagggcctcctgggcacccctctcaccca
ggacctgatggcatgagcaggcctttttcagctcagatggctgggctggatgaaaaatct
ggacttggaagtcaagtaggactcatgcctggctctgtgggtcctgttggcccaagagga
cctcagggtttacaaggacagcaaggtggtgtgggacccgcaggacctcctggtgagcct
ggcgagcctggaccaatgggtccaattggttctcgtggaccagagggcccacctgggaag
cccggagaagatggtgaacctggaagaaatgggaatacaggtgaagtgggattctcagga
tcaccaggtgctcgaggcttccctggtgctcctggtctccctggcttgaaaggtcacaga
ggacacaaaggtcttgaaggccccaaaggtgaaattggagcacctggtgctaagggtgaa
gctggccccactggtccaatgggtgctatgggccctctgggaccaagaggaatgccagga
gagaggggaagacttgggccacagggtgctcctggaaaacggggtgcccacggtatgcct
ggaaaacctggaccaatgggtcctcttgggatacctggctcttccggttttccaggaaat
cctggaatgaagggagaagcaggtcctactggagcccgaggccctgaaggtcctcagggg
cagagaggtgaaactgggccacctggtccagctggctctcagggtcttcctggtgcagtg
gggactgatggtacacctggcgccaaaggccccacaggctctgcaggaacctctggccct
cctggcttggcagggccccctgggtctcctggccctcaaggcagtactggacctcaggga
atccgaggacaatcgggtgatccaggagttccaggtttcaaaggagaagctggtccaaag
ggagaaccagggccacatggtattcagggtcccattggtccacctggtgaagaaggcaaa
agaggtcctcggggtgatccaggcacagttggtcctccaggaccaatgggagaaaggggc
gctcctggcaatcgtggttttccagggtctgatggtttacctggaccaaagggtgctcag
ggagagcgtggtcctgtaggttcttcggggcctaaaggaggccagggagatccaggacgt
ccaggagaacctgggcttccaggtgctcggggtctgacaggaaatcctggtgttcaaggt
cctgaaggaaaacttgggcctttgggtgctcctggggaagatggtcggccaggtcctcca
ggctccattgggatcagaggacagcctggaagcatgggccttccaggccccaaaggtagc
agtggtgaccttggaaaaccaggagaagcaggaaatgctggtgtgcctgggcaaaggggg
gctcctggcaaagatggagaagttggtccttcaggccctgtgggacctccgggcctagct
ggggaaagaggagagcagggacctccaggccccactggctttcagggacttcctggacct
ccagggccacctggagaaggtggaaaggctggtgatcaaggtgttcctggagagcctgga
gcagttggcccattaggacctcggggagaaagagggaatcctggagaaagaggagagcca
gggataactggactgcctggggagaaaggcatggctggaggacatggccctgatggtcca
aagggcaacccaggtccaactgggaccattggagacacagggccaccaggtcttcagggc
atgccaggagaaagaggaattgcaggaacacctggccctaagggtgaccgaggtggcata
ggagagaaaggtgctgaaggaacagcaggaaatgacggggcaaggggtcttccaggtccc
ttgggacctccaggtcctgcaggccctactggagaaaagggtgaacctggtcctagaggc
ttagttggccctcctggctcccgtggcaatcctggttctcgtggtgaaaatggtccaact
ggagctgttggttttgctggaccccagggtcccgatggacagcctggtgtcaagggtgag
cctggagagccaggacagaagggagatgctgggtctcctggaccccaagggctagcagga
tcacctggcccccatggtccacatggtgttcctggactgaaaggcggtagaggaacccag
ggtccacctggtgctacagggtttcctggttctgctggcagagttgggcctccaggccct
gctggagctccaggacctgcagggcccgcaggagaacctgggaaggaaggacctcctggt
cttcgtggtgaccctggctctcatgggcgagtgggagatagaggaccagctggcccacct
ggtagcccaggagataaaggggacccaggagaagatggacaacctggtccagatggtcct
cctggtcccgctggtaccactgggcaaagaggaattgttggaatgcccggacaacgtggg
gaacgaggaatgcctggccttcctggcccagcgggtacaccaggaaaagtaggaccaact
ggtgcgacaggagataaaggtccccctggacctgtaggacctccaggttccaatggtcct
gtaggagaacctgggccagaaggtccggctggtaatgatggtaccccaggacgggatggt
gctgttggagaacggggtgaccgtggagaccccgggcctgctggtctaccaggctctcag
ggtgcccctggaactcctggccctgttggtgcccctggagatgcaggacaaagaggagag
ccaggttctcgaggccctgtaggaccacctggtcgagctggaaagcgtggtttacctgga
ccacaaggacctcgaggtgacaagggtgacaatggagacagaggtgaccgaggtcagaaa
ggccacagagggttcactggcctgcagggtcttcctggacctcctggtccaaatggtgaa
caaggaagtgctggcattcctggtcctttcggtccaagaggtcctccaggaccagtaggt
ccttcaggaaaggaaggaaaccctgggccacttggaccaattggacctcctggtgtgcgg
ggcagtgtaggagaagcaggaccagagggtcctcctggtgaacctgggcctcctggccct
ccaggtccccctggccatcttactgctgctcttggtgatatcatgggacactatgatgag
aacatgccagatccacttccagagtttacggaagaccaggcagctccagatgacacaaac
aaaacagaccctgggatccatgttaccctgaagtctctcagtagtcagattgaaaccatg
cgtagccctgatggttccaagaaacacccagcccgcacttgtgatgatttaaagctttgc
catcccacaaagcagagcggtgaatattggattgatcctaaccagggatcagctgaagat
gcaatcaaagtttactgcaatatggaaacaggagagacatgtatttcagcaaacccagcc
agtgttccacgtaaaacctggtgggccagcaaatcccctgacaataagcctgtgtggtac
ggtcttgacatgaatagaggatctcagttcacatatggagattaccagtctcctaacaca
gctatcactcagatgacctttttgcgtcttttatcaaaagaagcctcgcagaaccttact
tacatctgtaggaacactgttggatatatggatgatcaagctaaaaacctcaagaaagct
gtggtccttaaagggtcaaacgacttagaaataaaaggagaaggaaacatcagattcaga
tacacagttcttcaagacacctgctctaagcgaaatggaaatgtaggcaaaactatcttt
gaatacagaacacagaatgtggcccgcttgcccatcatagatgttggtcctgtggatatt
ggcaatgcagaccaggaatttggccttgatattgggccagtttgtttcatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (32)   
   RefSeq(nuc) (2)   
   GenBank (15)   
   EMBL (15)   
Protein domain (5)   
   Pfam (5)   
All databases (86)   

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