KEGG   Mus musculus (house mouse): 13047
Entry
13047             CDS       T01002                                 
Symbol
Cux1, CDP, Cutl1, Cux, Cux-1
Name
(RefSeq) homeobox protein cut-like 1 isoform c
  KO
K09313  homeobox protein cut-like
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    13047 (Cux1)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain CUT
    13047 (Cux1)
SSDB
Motif
Pfam: CUT CUX1_N Homeodomain Homeobox_KN ATG17_like
Other DBs
NCBI-GeneID: 13047
NCBI-ProteinID: NP_001278162
MGI: 88568
Ensembl: ENSMUSG00000029705
UniProt: P53564 Q6AXG1 Q9JJB6 Q5BL05
Position
5:complement(136276989..136596429)
AA seq 1613 aa
MERASGPLRAAFSSPVLESKAPGAPLDCKETDCGSSSPRGDGIGASQSAAELPACPEDAI
LPATPHRNQLLALGVLPASASSAFAAPGQPQDSARWMLCVAGAKLKRELDATATVLANRQ
DESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLTVYKR
LIDVPDPVPALDVGQQLEIKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKE
KIREYEQTLKSQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTAL
EKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSL
QLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQI
SQLEQQLNAKNSTLKQLEEKLKGQADYEEVKKELNTLKSMEFAPSEGAGTQDSTKPLEVL
LLEKNRSLQSENATLRISNSDLSGSARRKGRDQPESRRPGPLPASPPPQLPRNTGEQVSN
TNGTHHFSPAGLSQDFFSSNLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTS
TIFSTGPYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQL
IKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALR
SIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIKSILEQAKRELQV
QKTAEPVQTSSTSSSGNSDDAIRSILQQARREMEAQQAALDPALKPAPLSQPDLTILTPK
HLSASPMSTVSTYPPLAISLKKTPAAPETSTAALPSAPALKKEAQDVPTLDPPGSADAAQ
GVLRPMKSELVRGSTWKDPWWSPIQPERRNLTSSEETKADETTASGKERAGSSQPRAERS
QLQGPSASAEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSPIVPMAKPAKPSV
PPLTPEQYEVYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKP
WSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVASLQDPLQQGCVSSESTP
KTSASCSPAPESPMSSSESVKSLTELVQQPCPAIETSKEGKPPEPSDPPASDSQPTTPLP
LSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLAR
PKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPS
VGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTST
VINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSSRAAPSSEGDSCDGVEATDAE
EPGGNIVATKSQGGLAEVAAAPADREEATQPAEKAKAQPLCSGTPGQDDGEDASRPRPLP
EGLADAPAPVPSLAAPAAGEDAATSATAPATATEAPGAARAGPAERSSALPSTSAPANAP
ARRPSSLQSLFGLPEAAGARDNLVRKKKAANLNSIIHRLEKAASREEPIEWEF
NT seq 4842 nt   +upstreamnt  +downstreamnt
atggagcgcgcgtcaggtccgctccgagctgccttctccagcccggttctcgaaagcaaa
gccccgggggccccgctggactgtaaggagactgattgtggttcctcgtcgcctcgaggg
gatggtatcggggcttcccaatccgcggcggagctgcctgcgtgcccagaggatgctatt
ctgcctgccacccctcatcggaaccagctgctcgccctcggggtcctccctgctagtgct
agctccgcgttcgcggcgcctggacagccccaggattctgccaggtggatgttgtgcgta
gccggagccaagttgaagagagaacttgatgccaccgcaacagtattggcaaacaggcaa
gatgagagcgaacagtccagaaagcggctcattgagcagagccgagaattcaagaagaac
actccagaggatttacgcaagcaggtagcaccactgctaaagagcttccaaggggagatt
gatgcactgagtaaaagaagcaaagaagcagaggcagccttcttgactgtgtacaagaga
ctaattgatgttccagatccggtaccagccctggacgtcgggcaacagctggaaataaaa
gtgcagcgtctacacgacattgaaacagagaaccagaaacttagggaaacactagaagag
tacaacaaggagtttgctgaagtgaaaaatcaagaggttacgataaaagcacttaaggag
aaaatccgagaatacgagcagaccctgaagagtcaggccgagaccattgctctggagaaa
gagcagaagctacaaaatgattttgcagagaaggagagaaagctgcaagagacacagatg
tccaccacctcaaaactggaggaagctgagcacaaactccagactctgcaaacagccctg
gaaaaaactcgaacagaattatttgacctgaaaaccaaatatgatgaagaaactactgca
aaggccgatgagatcgagatgatcatgaccgaccttgaacgagccaaccagagggcagag
gtggcacagagagaagcagagactttaagggaacagctctcatcggccaaccactctctc
caactggcctcgcagatccagaaggctccagatgtggagcaggccatagaggtgctgacc
cgatccagcctagaagtagagttggctgccaaagagcgggagatcgcccagctggtggaa
gatgtgcagcgactccaggccagcctcaccaagctacgtgagaattccgccagccagatc
tcacagctggagcagcaactgaatgccaagaatagcacactcaaacaactggaagaaaaa
ctcaaaggccaggctgactatgaagaagtgaagaaagagctgaacaccctgaagtccatg
gagtttgcaccatcggagggagcagggacacaggactctaccaagcccctggaggtttta
ctcctggagaagaaccgctcgctgcagtccgagaatgccacgctgcgcatctccaacagt
gacctgagcgggtcagccaggagaaaagggagagaccagcctgagagtcggcgcccggga
cccttgccggcctcccctcctcctcagttgccccgcaacacgggggaacaggtttccaat
actaacggtacacaccacttctcaccagcggggttaagtcaagactttttcagctcaaac
ctggccagccccagcctacccctggcttctacaggaaagtttgcactaaactctcttctc
cagcgacagctaatgcagtccttctactccaaggccatgcaggaagccggaagcacaagc
accattttttcaacaggtccttacagcacaaactccatatcttccccaagtccattacaa
caaagcccagatgtaaatggcatggccccatctcccagccaatcagaaagtgctgggagc
atctcagagggcgaggaaattgataccgcagagatcgcccggcaggtcaaagagcagctc
atcaagcacaacattggccagcgcatcttcggacattacgtcctgggactgtcgcaaggc
tctgtgagcgagatcctggcccggcccaagccctggaacaagctgactgtccgtggcaag
gagccattccacaagatgaagcagttcctgtctgatgagcagaacatcctggcactccgt
agcatccaaggcagacagagagagaatccaggccagagcctgaacagactctttcaggaa
gtaccgaaacgaagaaatgggtctgaaggtaacatcactacccggatccgagcatctgag
actggttctgatgaagccatcaagtccatcctggaacaagccaagagggaactacaagtg
cagaaaaccgctgagccagtccagacatcttccacgtccagcagtgggaactctgacgat
gccatccgctccatcctacagcaggcccgccgggaaatggaggcccagcaggctgccctt
gaccctgccttaaagccagcaccactgtcccagcccgacctcaccatcctcacccccaag
cacctgtctgcctcacccatgtctactgtgtccacttacccgcctcttgctatctccctg
aagaaaacccctgcagcacctgagaccagtaccgcagccttgcccagtgccccagctctc
aaaaaagaggctcaggatgtacccacactggacccaccaggatcagctgatgctgcccag
ggagtgctgaggccgatgaagagtgagctagtccgtggcagcacctggaaggatccctgg
tggagccctatacagcctgaaagaagaaacctcacttcttccgaagagaccaaggccgat
gaaacaactgcaagcgggaaagaaagggcaggcagcagccagcctcgggctgagcgcagc
cagcttcagggaccctcagcatccgcagagtactggaaagagtggccaagcgctgagtcc
ccatactcccagagctcagagctgagcctcactggagccagccgcagtgagacaccccag
aatagccctctgccctcttccccaattgtgcccatggcgaagccagccaagccttcagtg
cccccgctgactcctgagcagtacgaggtctacatgtatcaggaagtggacactatcgag
ctcactcggcaggtcaaagagaagctggccaagaacggcatttgccagaggatctttggg
gagaaggtactgggcctgtcccagggcagtgtcagcgacatgctttcaaggccaaaacca
tggagcaaactgacccagaaaggccgagaacccttcatccggatgcagctctggctgaat
ggagagctgggccaaggtgttctgccagtgcaagggcaacagcaagggccagtcctccac
tccgtggcgtctctgcaggaccccctccagcagggctgtgtgagctcagaaagcactcca
aagacctctgccagctgcagccctgcccctgagtccccaatgagttccagcgaatctgtg
aagagtctcaccgagctggtccagcagccctgtcccgccattgagaccagtaaagaaggc
aaaccaccagagcccagcgacccgcctgcctcagactcccagcccacaacaccgctgcct
ctctctggacactcagccctcagcatccaagaattagtagccatgtctcctgagctggac
acgtatggcataaccaagagggtcaaagaggtgctgacagacaacaacctcggtcagcgc
ttatttggggagaccattttggggctcacccagggttctgtctccgacctccttgcccgc
ccaaagccttggcataagcttagtctgaaaggacgggaaccctttgtccgcatgcagcta
tggctgaacgaccccaacaatgtggagaagctgatggatatgaagcggatggagaagaaa
gcctacatgaagaggcgacacagctctgtcagtgacagtcagccttgtgagcccccctct
gtgggtattgactatagccaaggcgccagcccccagccacaacaccagctgaagaaacct
cgagtggtgctggctccagaggagaaggaagcgctgaagcgagcatatcagcagaagcca
tacccatcaccaaaaaccatcgaggaacttgccacacaactcaacctgaagaccagcacc
gtcatcaactggttccataattacaggtctcggatccgcagagaactgttcattgaggag
attcaagctggaagccagggccaggctggtgccagcgactcaccttcagctcgaagtagc
cgcgctgcacccagctcggaaggtgacagctgtgacggcgtggaagccaccgacgccgag
gagccaggtggcaacatagtggccaccaagtctcagggagggctggcagaggtggccgca
gccccggcagaccgggaagaagcgacgcagccggcggagaaggcgaaggcacagccacta
tgctcggggaccccaggacaggacgacggtgaagacgcaagccggcctaggccacttccc
gagggcctcgccgacgccccagcgcctgtgccaagcctcgccgcacccgcggccggagag
gacgccgctacctcagccactgccccggccacggccaccgaggcccccggggcggccagg
gcgggccctgccgagaggagttctgcgttgccaagcaccagcgcgcctgccaacgcgcct
gcgcgaaggcctagctcactgcagagcctcttcggtctgcccgaggccgcgggcgcccgg
gacaacctggtgcggaagaagaaggctgcgaacttgaacagcatcatccaccgcctggag
aaggctgccagccgggaggagcccatcgaatgggagttctga

  All links  
Gene (60)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (28)   
   UniProt (5)   
   SWISS-PROT (1)   
   RefSeq(pep) (22)   
DNA sequence (98)   
   RefSeq(nuc) (22)   
   GenBank (38)   
   EMBL (38)   
Protein domain (5)   
   Pfam (5)   
All databases (191)   

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