KEGG   Mus musculus (mouse): 14399Help
Entry
14399             CDS       T01002                                 

Gene name
Gabra6, GABA-ARalpha6, Gabra-6, alpha6
Definition
(RefSeq) gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04080  Neuroactive ligand-receptor interaction
mmu04723  Retrograde endocannabinoid signaling
mmu04727  GABAergic synapse
mmu04742  Taste transduction
mmu05032  Morphine addiction
mmu05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    14399 (Gabra6)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    14399 (Gabra6)
   04723 Retrograde endocannabinoid signaling
    14399 (Gabra6)
  09157 Sensory system
   04742 Taste transduction
    14399 (Gabra6)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    14399 (Gabra6)
   05033 Nicotine addiction
    14399 (Gabra6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmu04040]
    14399 (Gabra6)
Ion channels [BR:mmu04040]
 Ligand-gated channels
  GABA-A
   14399 (Gabra6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Neur_chan_LBD Neur_chan_memb CytochromB561_N
Motif
Other DBs
NCBI-GeneID: 14399
NCBI-ProteinID: NP_001093111
MGI: 95618
Ensembl: ENSMUSG00000020428
Vega: OTTMUSG00000006343
UniProt: P16305
Position
11 A5; 11 25.03 cM
AA seq 453 aa AA seqDB search
MVLLLPWLFIILWLENAQAQLEDEGNFYSENVSRILDNLLEGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPAEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KTEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAATPPVAKSKASESLQAEI
VVHSDSKYHLKKRISSLTLPIVPSSEASKALSRTPILKSTPVSPPLLLPATGGTSKIDQY
SRILFPVAFAGFNLVYWIVYLSKDTMEVSSTVE
NT seq 1362 nt NT seq  +upstreamnt  +downstreamnt
atggtcttgcttctcccctggctcttcattattctatggctagaaaatgcccaagctcaa
cttgaagatgaaggcaacttctactctgaaaatgtcagtcggattcttgacaacttgctg
gaaggctatgacaaccgtctacggccaggatttgggggtgctgtaacagaagtcaaaaca
gacatctatgtgaccagctttggacctgtgtcagatgtggagatggagtatacaatggat
gttttcttccgccagacttggactgatgagagactgaaatttaaaggccctgctgagatt
ctgagcttaaataacttgatggtcagtaagatctggactcctgacacttttttccggaat
gggaaaaagtcaattgctcacaacatgaccacccccaacaagctcttccgattaatgcag
aatggaacaatcctctataccatgaggctcaccatcaacgctgattgccccatgagattg
gttaacttccctatggatggacacgcttgtccactcaagtttgggagctatgcttatcct
aaaactgaaatcatatatacatggaaaaaaggaccactttactcagtagaagtcccagaa
gaatcttctagcctcctccagtatgatttgattgggcaaacagtttctagtgagacaatt
aaatctaacactggtgaatatgtaatcatgacagtctatttccacttacaaaggaagatg
ggctatttcatgatccagatatacactccgtgcatcatgacagtcattctttctcaagtg
tctttctggattaataaggagtcagtcccagcaagaactgtctttggaatcaccactgtt
ttaaccatgaccaccttaagcatcagtgctcggcactctctacccaaagtgtcctatgca
accgccatggattggttcatagctgtatgctttgcttttgtcttttctgctctcattgaa
ttcgcagctgtcaactacttcaccaatctccagtcacagaaggctgaaaggcaggcacaa
actgcagccacgccccctgtggcaaagtcaaaagcgtctgaatccctgcaagcagagatt
gttgtgcattctgactccaagtaccatctgaagaagagaatcagctctctgactttgccc
atcgttccatcttctgaggccagcaaagccctcagtagaacgcccatcttaaaatcgacg
cctgtctctcccccattgctcttaccagccactgggggcaccagcaaaatagatcagtat
tctcgaattctcttcccagtagcttttgcaggattcaaccttgtgtactggatagtttac
ctttccaaagatacaatggaagtgagcagtactgttgagtag

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