KEGG   Mus musculus (mouse): 15078
Entry
15078             CDS       T01002                                 

Gene name
H3f3a, EyeLinc14, H3-3, H3-3a, H3-3b, H3.3, H3.3A
Definition
(RefSeq) H3.3 histone A
  KO
K11253  histone H3
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04613  Neutrophil extracellular trap formation
mmu05034  Alcoholism
mmu05202  Transcriptional misregulation in cancer
mmu05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    15078 (H3f3a)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    15078 (H3f3a)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    15078 (H3f3a)
  09165 Substance dependence
   05034 Alcoholism
    15078 (H3f3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    15078 (H3f3a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    15078 (H3f3a)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    15078 (H3f3a)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   15078 (H3f3a)
SSDB
Motif
Pfam: Histone CENP-T_C PAF CENP-S CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 15078
NCBI-ProteinID: NP_032236
MGI: 1097686
Ensembl: ENSMUSG00000060743
Vega: OTTMUSG00000021525
UniProt: P84244
Structure
PDB: 
5XM0 5XM1

Position
1; 1 H4
AA seq 136 aa
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
MPKDIQLARRIRGERA
NT seq 411 nt   +upstreamnt  +downstreamnt
atggctcgtacaaagcagactgcccgcaaatccaccggtggtaaagcacccaggaaacaa
ctggctacaaaagccgctcgcaagagtgcgccctctactggaggggtgaagaaacctcat
cgttacaggcctggtactgtggccctccgtgaaatcagacgctatcagaagtccactgaa
cttctgatccgcaagctcccctttcagcgtctggtgcgagaaattgctcaggacttcaaa
acagatctgcgcttccagagtgcagctattggtgctttgcaggaggcaagtgaggcctat
ctggttggcctttttgaagataccaatctgtgtgctatccatgccaaacgtgtaacaatt
atgccaaaagatatccagctagcacgccgcatacgcggagaacgtgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (710)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (702)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (77)   
   RefSeq(nuc) (1)   
   GenBank (38)   
   EMBL (38)   
Protein domain (5)   
   Pfam (5)   
All databases (803)   

Download RDF
DBGET integrated database retrieval system