KEGG   Mus musculus (house mouse): 18472
Entry
18472             CDS       T01002                                 
Symbol
Pafah1b1, LIS-1, Lis1, MMS10-U, Mdsh, Ms10u, Pafaha
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit beta
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu00565  Ether lipid metabolism
mmu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    18472 (Pafah1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    18472 (Pafah1b1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    18472 (Pafah1b1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    18472 (Pafah1b1)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18472 (Pafah1b1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_EIPR1 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 ANAPC4_WD40 LisH_PAC1 Beta-prop_EML ASA1 NBCH_WD40 Beta-prop_SCAP Beta-prop_Vps41 PAC11 CFAP251_N WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 TRM82_WD Beta-prop_SPT8 Beta-prop_NOL10_N LisH Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_IFT140_1st SHKBP1_KCTD3_C eIF2A Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Nucleoporin_N Beta-prop_ACSF4 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 LisH_SSDP Pox_A_type_inc Beta-prop_WDR11_2nd LisH_UCP007778 ARMC9_LisH LisH_2 SutA-RBD CEP162_coil_mid
Other DBs
NCBI-GeneID: 18472
NCBI-ProteinID: NP_038653
MGI: 109520
Ensembl: ENSMUSG00000020745
UniProt: P63005 Q5SW18
Structure
Position
11:complement(74564775..74615210)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcccagagacaacgagatgaactaaatcgagctatagcagattatcttcgt
tcaaatggctatgaagaggcatattccgtttttaaaaaggaagctgaactagatatgaat
gaagaattagataagaagtatgctggtcttttggaaaaaaaatggacatctgttattaga
ttacaaaaaaaggtaatggaattagaatcaaaactaaatgaagcaaaagaagaatttacg
tcgggtggtcctcttggtcagaaacgggacccaaaagaatggattccccgtccacctgag
aaatacgcattgagtggtcataggagtccagttactcgagtcattttccatcctgtgttc
agtgttatggtctctgcttcagaggatgctacaattaaggtgtgggattatgagactgga
gattttgagcgaactctcaagggccatacagactctgtacaggacatttcctttgaccac
agtggcaagcttctggcttcctgttcagcagatatgacgattaaattatgggattttcag
ggttttgaatgcatcagaaccatgcacggtcacgatcacaatgtctcttcagtagccatc
atgcctaatggagatcatatagtgtctgcctcaagggataaaactataaagatgtgggaa
gtgcaaactggctactgtgtgaagacattcacaggacacagagaatgggtacgtatggtg
cggccaaatcaggatggcactctgatagccagctgttccaatgaccagactgtgcgtgtg
tgggttgtagcaacaaaggaatgcaaggctgagctccgagaacatgaacatgtggtggaa
tgcatttcctgggctccagaaagttcatattcttccatctctgaagcaacaggatctgag
actaaaaaaagtggcaagcctggacctttcttgctatctggttccagagacaaaactatt
aagatgtgggacgtcagtactggcatgtgccttatgactcttgtgggtcatgataactgg
gtacgtggagttctgttccattctggggggaagtttattttgagttgtgctgatgacaag
accctccgtgtatgggattataagaacaagcgatgcatgaagaccctcaatgcgcatgaa
cactttgttacctccttggatttccataagacggcaccctatgtggttactggcagtgta
gatcaaacagtaaaggtgtgggagtgccgttga

  All links  
Gene (17)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (60)   
   RefSeq(nuc) (2)   
   GenBank (29)   
   EMBL (29)   
3D Structure (2)   
   PDB (2)   
Protein domain (63)   
   Pfam (63)   
All databases (146)   

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