KEGG   Mus musculus (house mouse): 192232
Entry
192232            CDS       T01002                                 
Symbol
Hps4, 2010205O06Rik, BLOC-3, C130020P05Rik, le, mKIAA1667
Name
(RefSeq) HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
  KO
K20194  Hermansky-Pudlak syndrome 4 protein
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    192232 (Hps4)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Others
   BLOC-3 complex
    192232 (Hps4)
SSDB
Motif
Pfam: Intu_longin_1 Intu_longin_3
Other DBs
NCBI-GeneID: 192232
NCBI-ProteinID: NP_619587
MGI: 2177742
Ensembl: ENSMUSG00000042328
UniProt: Q99KG7 Q541V2
Position
5:112490849..112526290
AA seq 671 aa
MATTTPPETKSAAWWNYFFLYDGSKVKGEGDPTRAGICYFYPPQTLLDQQELLCGQLAGV
VRCLWDLSGTPPMLIRMRNLKFAIRADGDYLWALGCGVEISDASCRQFLDQLIGFFHFYM
GPVSLAYKSHPQEELSLQWDTSITQVLRSTSESHRIFNALWNLDRTKVEPLLLLKAALIL
QTCQRSPHVLAGCILYKGLIVNSQLLPSLTAKVLLHQTVPADQRLPGAGAAPQETGAALP
PDVQITSVFLSEEEVASLHEFPVEHETRLQGSSVQYPPWDQSSPTQAEDAWASAAIPEPT
PHDGACPSGSGADERLPRLEQECAGPTGLCTTACGQGSGLSSRLQKELCLSREELDSSEM
HVSEAQEAFPPLPALGDLETLHSSHSAPTLPEDTAICSCLHPCPLERLPESGRLGQLADL
PLTNGQTQVPGTDPLPSSMPVALPPQHPVGVEPSVEPYGNGAQESHSALPRSSRSPDSPG
PSPSADRTGFKPSPSGRHAGLVPMNLYTHSVNGLVLSLLAEETLLSDTAAIEEVYHSSLA
SLNGLEVHLKETLPRDEASLTSSTYNFLHYDRIQSVLSANLPLVTAPQDRRFLQAVNLMH
SDFALLPMLYEMTIRNASTAVYACSSPAQETYFQQLAPTARSSGFPNPQDCAFSLAGKAK
QKLLKHGVNLL
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggccaccaccactcccccagagacaaagtcagcagcgtggtggaactacttcttcctg
tatgacggttccaaggtaaagggagaaggagacccaaccagagctggcatctgctacttc
tatccgccccagaccctgttagaccagcaggaactgctctgtggccagcttgctggagta
gtgcgctgcctgtgggacctttctggcaccccgcccatgctcatccgtatgcggaacctc
aagtttgccatcagggcagatggggactacctgtgggctctggggtgtggtgtggagatc
tctgatgccagctgcaggcagtttctggatcagctcattggattttttcatttctacatg
ggccctgtctccctggcctacaagagccatcctcaggaggagctgagcttgcagtgggat
acctccatcacacaagtcctcaggagcaccagcgaatcgcacaggatcttcaatgccctg
tggaacctggaccgcaccaaagtggagcccctgctgctgctgaaggcagctctcatctta
cagacctgccaacgctcacctcatgtgctagctggctgcatcctctataaaggactgatt
gtgaattcccagctcctgccttccctcactgctaaggtcctgcttcatcagactgtacct
gcagaccagaggctgcctggagcaggagctgccccacaggaaacaggagcagcgttgccc
ccggatgtgcagatcacctctgtttttctgagtgaggaggaagttgccagcctccacgag
ttcccagtagagcatgaaactcgactccagggaagttcagttcaataccctccctgggat
caaagcagccccacccaggcagaagatgcctgggcatcagctgccatcccggagcccacg
ccgcatgatggagcatgtccgagtggcagcggggcagatgaacgcttgcctaggcttgag
caggagtgtgctgggcccacgggactgtgcaccactgcctgtggccagggctccggcctc
agcagcaggctgcagaaggagctgtgtctctcccgggaggaactggactcgtctgaaatg
cacgtttctgaggctcaggaagccttcccacctttgcctgccctgggtgatctggagact
ctccacagcagccacagtgcccccactctacctgaagacacagccatttgcagctgcctg
cacccttgccctcttgagaggctccctgagagtggaaggctaggacagctcgcagacctg
cccctcaccaatggccaaacccaggttcctggcacagaccctctccccagcagcatgcct
gtggcacttcctccccagcatcctgtgggtgtagagcccagtgtggagccatacgggaat
ggagcccaggagagccactcagccctgccacgcagttcccgctcacctgactctccgggc
cccagcccctctgcagacagaactggcttcaagccatccccatctggacgccacgcaggg
ctcgtgcccatgaacctctacacccacagtgtgaacggactggtgctgtccctgctggcc
gaagagactcttctcagcgacactgcagccatcgaggaggtgtaccacagcagcctggcg
tcgctgaatgggctggaagtccacctgaaggagacgctgcccagagacgaggctagcctc
accagcagcacatacaacttccttcattatgaccgcatccagagcgtgctctcagccaac
ctgcccctagtgactgctccccaggaccgccggtttctgcaggccgtcaacctcatgcac
tccgactttgccctgctgcctatgctgtacgagatgaccatcaggaacgcctccacagcc
gtgtacgcctgcagcagcccagcccaggagacctacttccagcagctggcacccactgcc
cgcagctctggcttcccaaaccctcaggattgcgccttcagcctcgcaggcaaagccaag
cagaagctgctgaagcacggggtaaacctgctgtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (56)   
   RefSeq(nuc) (6)   
   GenBank (25)   
   EMBL (25)   
Protein domain (2)   
   Pfam (2)   
All databases (101)   

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