KEGG   Mus musculus (house mouse): 19883
Entry
19883             CDS       T01002                                 
Symbol
Rora, 9530021D13Rik, Nr1f1, ROR1, ROR2, ROR3, nmf267, sg, staggerer, tmgc26
Name
(RefSeq) RAR-related orphan receptor alpha
  KO
K08532  RAR-related orphan receptor alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04659  Th17 cell differentiation
mmu04710  Circadian rhythm
mmu05017  Spinocerebellar ataxia
mmu05321  Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    19883 (Rora)
  09159 Environmental adaptation
   04710 Circadian rhythm
    19883 (Rora)
 09160 Human Diseases
  09163 Immune disease
   05321 Inflammatory bowel disease
    19883 (Rora)
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    19883 (Rora)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    19883 (Rora)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mmu03310]
    19883 (Rora)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    19883 (Rora)
Nuclear receptors [BR:mmu03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   19883 (Rora)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 19883
NCBI-ProteinID: NP_038674
MGI: 104661
Ensembl: ENSMUSG00000032238
UniProt: P51448 Q8C3F5
Position
9:68560627..69295528
AA seq 523 aa
MESAPAAPDPAASEPGSSGSEAAAGSRETPLTQDTGRKSEAPGAGRRQSYASSSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggagtcagctccggcagcccccgaccccgccgccagcgaaccgggcagcagcggctcg
gaggcggccgcgggctccagggagaccccgctgacccaggacacgggccgcaagagcgag
gcaccgggcgcggggcgcaggcagagctatgcgagctccagccgaggtatctcagtcacg
aagaagacacacacatctcaaattgaaattattccatgcaagatctgtggagacaaatcg
tcaggaatccattatggtgtcattacgtgtgaaggctgcaagggctttttcaggagaagt
cagcagagcaatgccacctactcctgtcctcgtcagaagaactgtttgattgatcggacc
agcagaaaccgctgccagcattgtcggctgcagaaatgcctggccgtggggatgtctcga
gatgctgtcaagtttggtcggatgtccaagaagcagagagacagcttgtacgccgaggtg
cagaagcaccggatgcagcagcagcagcgagaccaccagcagcagcctggggaggcggag
ccgctgacgcccacctacaacatctcagccaatgggctgacggaactgcatgatgacctc
agcacctatatggatgggcacacccccgagggcagcaaggccgactcagccgtcagcagc
ttctacctggacatccagccctccccagaccagtcgggattggacatcaatgggatcaaa
cccgaacccatatgtgactacacaccagcatctggcttcttcccctactgttccttcacc
aacggagagacttccccaaccgtgtccatggcagaactagaacaccttgcccagaacata
tccaaatcccacctggaaacctgccagtacttgcgggaagagctccagcagataacgtgg
cagaccttcctgcaggaggagattgaaaactaccagaacaagcagagagaggtgatgtgg
cagctgtgtgccatcaagattacagaagctatccagtatgtggtggagtttgccaaacgc
attgatggatttatggagctgtgtcaaaatgatcaaattgtgcttctaaaagcaggctcg
ctagaggtggtgtttattaggatgtgccgtgcctttgactctcagaacaacaccgtgtac
tttgacgggaagtatgcgagccccgatgtcttcaagtccctaggttgtgaagacttcatc
agctttgtgtttgaatttgggaagagtttgtgttctatgcacctgaccgaagacgaaatc
gcgttattttctgcattcgtactgatgtcagcggatcgctcgtggcttcaggaaaaggta
aaaatagaaaagctgcaacagaaaattcagctggcccttcagcacgtcctacagaagaac
caccgagaagatggaattctaaccaagctaatatgcaaggtgtctacgttaagagcccta
tgtggacgacatacggaaaagctaatggcatttaaagcaatatacccagacattgtgcga
ctccattttcctccattatacaaggaattgttcacttcagaatttgagccagccatgcaa
atcgatgggtaa

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