KEGG   Mus musculus (mouse): 20014
Entry
20014             CDS       T01002                                 

Gene name
Rpn2, 1300012C06Rik, AV261018, Rp, Rpn-2
Definition
(RefSeq) ribophorin II
  KO
K12667  oligosaccharyltransferase complex subunit delta (ribophorin II)
Organism
mmu  Mus musculus (mouse)
Pathway
mmu00510  N-Glycan biosynthesis
mmu00513  Various types of N-glycan biosynthesis
mmu01100  Metabolic pathways
mmu04141  Protein processing in endoplasmic reticulum
Module
mmu_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    20014 (Rpn2)
   00513 Various types of N-glycan biosynthesis
    20014 (Rpn2)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    20014 (Rpn2)
SSDB
Motif
Pfam: Ribophorin_II HSM3_N DUF5859
Other DBs
NCBI-GeneID: 20014
NCBI-ProteinID: NP_062616
MGI: 98085
Ensembl: ENSMUSG00000027642
Vega: OTTMUSG00000016167
UniProt: Q9DBG6
Position
2 H1; 2 78.2 cM
AA seq 631 aa
MAPPGSSAVFLLALTITASVQALTPTHYLTKQDVERLKASLDRPFTDLESAFYSIVGLSS
LGVQVPDVKKACTFIKSNLDPSNVDSLFYAAQSSQVLSGCEISVSNETKELLLAAVSEDS
PIAQIYHAVAALSGFGLPLASNEALGALTARLGKEETVLATVQALQTASHLSQQADLRNI
VEEIEDLVARLDELGGVYLQFEEGLELTALFVAATYKLMDHVGTEPSMKEDQVIQLMNTI
FSKKNFESLSEAFSVASAAAALSQNRYHVPVVVVPEGSTSDTQEQAILRLQVSNVLSQPL
AQAAVKLEHAKSAATRATVLQKTPFSLVGNVFELNFKNVKLSSGYYDFSVRVEGDSRYIA
NTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADSHQNFALFFQL
VDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDNKNVYKFELDTSERKIEFDSASGTYT
LYLIIGDATLKNPILWNVADVVIKFPEEEAPSTVLSQSLFTPKQEIQHLFREPEKRPPTV
VSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTVIFHLGHAAMLGLMYIYWTQLNMF
QTLKYLAVLGTVTFLAGNRMLAQHAVKRTAH
NT seq 1896 nt   +upstreamnt  +downstreamnt
atggcgccgccgggttcaagcgctgtcttcctgttggccctgacaatcactgccagcgtc
caggctctgacccccacccactacctcaccaagcaggatgtggaaaggctgaaggcctca
ctggaccgccccttcacagatttggagtctgccttctactccatcgtgggactcagcagc
cttggggtacaggtgccagatgtcaagaaagcgtgtaccttcatcaagtccaaccttgat
cccagcaacgtggattctctcttctatgcagcccagtccagccaggtcctctcaggctgt
gagatatctgtttcaaatgagaccaaagagctcctgctggcagcagtgagtgaagactcc
cccattgcccagatctaccatgcagttgcagcactcagcgggtttgggcttcccttggca
tccaatgaagccctcggtgcccttaccgctcgcctcggcaaggaagagactgtgctagca
acggtccaggctctgcagacagcgtcccacctctcccagcaggctgacctgaggaacatt
gtagaggagattgaggaccttgttgctcggctggatgaactagggggtgtgtatctgcag
tttgaggaaggactggagctcacggcgctgtttgttgctgccacctacaagctcatggac
cacgtggggaccgaaccgtccatgaaggaggatcaggttatccagctcatgaacacaatc
ttcagcaagaagaactttgagtccctctcagaagccttcagtgtggcctctgctgctgct
gcattgtcccagaatcgctaccacgtaccagtggtggttgtgcccgagggctctacttct
gacactcaagaacaggctatcctgaggttgcaggtcagcaatgttttgtctcagcctctg
gctcaagctgcagtgaagctggagcatgctaagtcggcggctaccagggctaccgtcctg
cagaagacgcccttttcgcttgtggggaatgtttttgagctaaacttcaagaatgttaaa
ctttccagtggctactatgacttctctgtccgagttgaaggtgacagccgttacattgca
aacactgtagagcttcgagtcaagatctccactgaagttggcatcacaaatgttgatctt
tccactgtggataaggatcagagcattgcacccaaaactacccgggtgacctacccagcc
aaagccaagggtacattcatcgcagacagccatcagaactttgccctgtttttccagctg
gtagatgtgaacaccggtgcggagctcacccctcaccagacgtttgttcgacttcataac
cagaagactggccaggaagtggtgtttgttgctgagccagataacaagaatgtatataag
tttgaactggacacctctgaaaggaagattgaatttgactctgcctctggcacctacaca
ctctacttaatcatcggggatgccacattgaagaacccaatcctctggaacgtggctgac
gtggttatcaagttccctgaggaggaagccccctcgactgtgctgtcccagagcctgttt
accccaaaacaggaaattcagcacctgttccgagagcctgagaagaggccccccacagtg
gtgtccaatacattcacggccctcatcctctcgcccttgctcctgctctttgcactgtgg
atccggattggagccaatgtctccaacttcacatttgctcctagcacagttatcttccac
ctgggacatgctgcgatgctgggcctcatgtatatctactggactcagctcaacatgttc
cagaccctcaagtacctggctgtcctgggcactgtgacgtttctggctggcaaccgaatg
ctggcccagcatgcagttaagagaacagcacattag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (53)   
   RefSeq(nuc) (9)   
   GenBank (22)   
   EMBL (22)   
Protein domain (3)   
   Pfam (3)   
All databases (95)   

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