KEGG   Mus musculus (house mouse): 20238
Entry
20238             CDS       T01002                                 
Symbol
Atxn1, 2900016G23Rik, Atx1, Gm10786, Sca1
Name
(RefSeq) ataxin 1
  KO
K23616  ataxin 1/1L
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04330  Notch signaling pathway
mmu05017  Spinocerebellar ataxia
mmu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    20238 (Atxn1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    20238 (Atxn1)
   05022 Pathways of neurodegeneration - multiple diseases
    20238 (Atxn1)
SSDB
Motif
Pfam: ATXN-1_C AXH
Other DBs
NCBI-GeneID: 20238
NCBI-ProteinID: NP_001186233
MGI: 104783
Ensembl: ENSMUSG00000046876
UniProt: P54254
Position
13:complement(45703231..46118467)
AA seq 791 aa
MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHCVEGVAWLPSTPGIRGHGGGRH
GSAGTSGEHGLQGMGLHKALSAGLDYSPPSAPRSVPTANTLPTVYPPPQSGTPVSPVQYA
HLSHTFQFIGSSQYSGPYAGFIPSQLISPSGNPVTSAVASAAGATTPSQRSQLEAYSTLL
ANMGSLSQAPGHKVEPPPQQHLSRAAGLVNPGSPPPPTQQNQYIHISSSPQSSGRATSPP
PIPVHLHPHQTMIPHTLTLGPSSQVVVQYSDAGGHFVPRESTKKAESSRLQQAMQAKEVL
NGEMEKSRRYGASSSVELSLGKASSKSVPHPYESRHVVVHPSPADYSSRDTSGVRGSVMV
LPNSSTPSADLEAQQTTHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPL
PVGLPATAFYAGTQPPVIGYLSGQQQAITYAGGLPQHLVIPGNQPLLIPVGSPDMDTPGA
ASAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPT
TASPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEESHSP
GVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCIS
LTLKNLKNGSVKKGQPVDPASVLLKQAKTDSLAGSRHRYAEQENGINQGSAQVLSENGEL
KFPEKIGLPAAPFLSKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVK
ICIEGRSNVGK
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgaaatccaaccaagagcggagcaacgaatgcctgcctcccaagaaacgtgagatcccc
gccaccagccggccctcggaggagaaggccactgctctgcccagcgacaaccactgcgtg
gagggtgtggcctggctccccagcacccctggcatccgcggccatgggggtgggcggcac
gggtcagcagggacttccggggagcatggtttacaaggaatgggtttacataaagcactg
tccgcagggctggattactccccacccagtgcccccaggtcagtccccacagccaacacg
ctgcccaccgtgtaccctcctcctcagtcagggaccccggtgtctcctgtgcagtacgcc
cacctttcgcataccttccagttcattgggtcctcccaatacagtgggccttacgcgggc
tttatcccttcccagctgatctccccatcaggcaacccggtcaccagtgcagtagcctca
gctgcaggggccaccactccatcacagcgctcccagctggaggcttattccaccctgctg
gccaacatgggcagtctgagccaggcaccaggacataaggttgagccccctccgcagcag
cacctcagcagggctgcaggattagtcaacccggggtcccctcctccacccacccagcag
aaccagtacatccatatttccagctctccacagagctccgggcgggcgacatctccccca
cccatcccggtccacctccatccccatcagacgatgatcccgcacacactcaccctgggg
ccttcatcccaggtggttgtgcaatatagtgatgccggaggccactttgttcctcgagag
tccaccaaaaaagccgagagcagcaggttgcagcaggctatgcaagccaaggaagtcctg
aatggggagatggagaaaagccggaggtatggggcatcatcttctgtggagctgagccta
ggcaaggcaagcagtaagtcagtgcctcatccctatgagtccaggcatgtggtggtccac
ccaagcccagcagactacagcagtcgtgatacctccggggtccgtggatctgtgatggtt
ctgcctaatagcagcacaccctcagccgacctggaggcccagcagaccacgcatcgagag
gcctccccatccaccctcaatgacaagagcggcctgcacctagggaagccgggccacagg
tcttatgcgctgtccccccacacggtcattcagaccacacacagtgcatcagagcctctc
ccggtgggcctaccagccacggccttctacgctggcactcaacctcctgtcatcggctac
ctgagcggccagcagcaagcaatcacctatgctggtggtctgccgcagcacctggtgatc
ccaggtaaccagcccctgctcatcccggtgggcagccctgacatggacacgcctggggca
gcctcggccatcgtgacgtcatcaccccagtttgctgcagtacctcacacgtttgtcacc
accgccctgcccaagagcgagaacttcaacccagaggctctggtcacccaggctgcctac
ccagccatggtgcaggcccagatccacctgccggtggtgcagtccgtggcgtcccccacc
acggcgtctcccacgctgccgccatatttcatgaaaggctccatcatccagctggccaac
ggggagctgaagaaggtggaggacctgaagacggaggatttcatccagagtgcagagatt
agcaatgacctcaagatcgactccagtactgtggagagaatcgaggagagccacagcccc
ggggtggccgtgatacagtttgctgttggtgaacaccgagcccaggtcagtgtcgaagtc
ttggtagagtatcctttttttgtatttggacagggctggtcatcctgctgtcctgagcgg
accagccagctctttgatctgccgtgttccaaactctctgttggggacgtctgcatctcg
ctcaccctcaagaacctgaagaatggctctgttaaaaagggccagcctgtggaccctgcc
agcgtcctgctgaagcaggcaaagaccgacagcctggctggcagcagacacagatacgcg
gagcaggaaaacggaatcaaccagggaagcgcccaggtgctctctgagaatggcgaactg
aagtttccagaaaaaataggattgcctgcagcacccttcctcagcaaaatagaaccgagc
aaacccacagccacgaggaagaggaggtggtcggcgccggagacccgtaaactggagaag
tcggaggacgagccacctttgactcttcccaagccttcgctcattcctcaggaggttaag
atctgcatcgaaggccgatctaacgtgggcaagtag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (22)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (20)   
DNA sequence (48)   
   RefSeq(nuc) (20)   
   GenBank (14)   
   EMBL (14)   
Protein domain (2)   
   Pfam (2)   
All databases (98)   

Download RDF
DBGET integrated database retrieval system