KEGG   Mus musculus (house mouse): 20349
Entry
20349             CDS       T01002                                 
Symbol
Sema3e, 6430702L12, Semah, mKIAA0331
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
  KO
K06840  semaphorin 3
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    20349 (Sema3e)
SSDB
Motif
Pfam: Sema ig Ig_6 V-set PSI Ig_3 Ig_2
Other DBs
NCBI-GeneID: 20349
NCBI-ProteinID: NP_035478
MGI: 1340034
Ensembl: ENSMUSG00000063531
UniProt: P70275
Position
5:14075290..14306703
AA seq 775 aa
MAPAGHILTLLLWGHLLELWTPGHSANPSYPRLRLSHKELLELNRTSIFQSPLGFLDLHT
MLLDEYQERLFVGGRDLVYSLNLERVSDGYREIYWPSTAVKVEECIMKGKDANECANYIR
VLHHYNRTHLLTCATGAFDPHCAFIRVGHHSEEPLFHLESHRSERGRGRCPFDPNSSFVS
TLVGNELFAGLYSDYWGRDSAIFRSMGKLGHIRTEHDDERLLKEPKFVGSYMIPDNEDRD
DNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNKWSTFLKARLVCSVPGMN
GIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCVYHMSSIREAFNGPYAHK
EGPEYHWSLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDDAIRFARMHPLMYQPIKPVHK
KPILVKTDGKYNLRQLAVDRVEAEDGQYDVLFIGTDTGIVLKVITIYNQETEWMEEVILE
ELQIFKDPAPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPYCAWD
GISCSRYYPTGAHAKRRFRRQDVRHGNAAQQCFGQQFVGDALDRTEERLAYGIESNSTLL
ECTPRSLQAKVIWFVQKGRDVRKEEVKTDDRVVKMDLGLLFLRVRKSDAGTYFCQTVEHN
FVHTVRKITLEVVEEHKVEGMFHKDHEEERHHKMPCPPLSGMSQGTKPWYKEFLQLIGYS
NFQRVEEYCEKVWCTDKKRKKLKMSPSKWKYANPQEKRLRSKAEHFRLPRHTLLS
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggcaccggccggacacatcctcaccttgctgctctggggtcacctgctggaactctgg
accccaggtcactccgcgaacccctcctaccccaggctacgcctgtcacataaagaactt
ttggaactgaataggacttcaatatttcaaagcccccttggatttcttgatctccataca
atgctgctggatgagtatcaagaacggctctttgtgggaggcagagaccttgtctattcc
ctgaacttggaacgagtcagtgacggctacagagagatatactggccgagcacagcagta
aaggtagaagaatgcataatgaaaggaaaagacgcaaatgagtgtgccaattatatccgg
gttttgcatcactacaacaggacacaccttctgacctgtgctactggagcttttgatcca
cactgtgccttcatcagagtcgggcaccattcagaggaacccctgtttcacctggagtca
cacagatctgagagaggaaggggcagatgtccttttgaccccaactcctcctttgtgtcc
acgctagttgggaatgagctgtttgctggactctacagtgactattggggcagagactcg
gcgatcttccgcagcatggggaagttaggccatattcgcactgagcatgacgatgagcgg
ctcctgaaagaaccaaaatttgtaggttcatatatgattcctgataacgaagaccgagat
gacaacaaaatgtactttttctttactgagaaggcgctggaggcggagaacaacgcccac
acgatctacacccgagtggggcggctgtgcgtgaatgacatgggaggacagagaatcctg
gtgaacaagtggagcactttccttaaagcgcggctggtttgctcagtgccgggaatgaat
ggaatcgacacatactttgacgaactagaggatgtgtttttactgccgaccagagatcct
aagaatccagtgatatttggactgtttaatactaccagcaatatatttagaggccatgct
gtatgtgtgtatcacatgtcaagtatccgggaagcctttaatggcccatatgctcataaa
gaaggccctgaataccactggtcactatatgaaggaaaagtcccctacccaaggcctggt
tcctgtgccagcaaagtaaacggaggcaagtatggaaccaccaaagattaccccgatgac
gccatccggttcgcaaggatgcatcctctaatgtatcagcccataaaacctgttcataaa
aaaccaatactggtaaaaacagatggaaaatacaacctgaggcaacttgccgtggatcgg
gtggaagcggaggatggccagtatgacgtcttatttattgggacagacacaggaattgtg
ctgaaagtaatcacaatttacaaccaagaaacagagtggatggaggaagtcattctagag
gaacttcaaatattcaaggatccagcccctatcatttctatggaaatttcttcaaagaga
caacagctttacattggatcagcctctgctgtggcacaagtcagattccatcactgcgac
atgtatggcagtgcttgtgctgactgctgcctggctcgagacccgtactgtgcctgggat
ggcatatcctgctccaggtactacccaacaggtgcacacgcaaagaggaggttccgcagg
caggacgttcggcatggcaacgccgcccaacagtgctttggacagcaatttgttggagac
gcgttggacaggactgaagagaggctggcttatggcatagagagcaacagtactctgttg
gaatgcaccccgcgatcactacaagcaaaagtcatctggtttgtacagaagggacgcgac
gtaagaaaagaagaggtgaagacggatgacagagttgtcaagatggacttgggcttgctc
ttcctcagagtacgcaagtcagatgcagggacctatttttgccagacagtagaacacaat
tttgtccatactgtgcgtaaaatcaccttggaggtggtcgaagagcataaagtggagggc
atgtttcataaggaccatgaagaggaaagacatcacaagatgccctgccctcccttaagc
ggtatgtctcaggggacaaaaccgtggtacaaggaattcttgcagctgattggctacagc
aacttccagagagtggaagaatactgcgaaaaggtgtggtgtacagataagaagaggaaa
aagcttaaaatgtctccctccaagtggaagtatgccaacccccaggaaaagaggcttcgc
tctaaagctgagcacttccgcctgcccaggcacacgctgctctcctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
Protein domain (7)   
   Pfam (7)   
All databases (61)   

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