KEGG   Mus musculus (house mouse): 20351
Entry
20351             CDS       T01002                                 
Symbol
Sema4a, SemB, Semab
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
  KO
K06521  semaphorin 4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    20351 (Sema4a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mmu04090]
    20351 (Sema4a)
CD molecules [BR:mmu04090]
 Proteins
  20351 (Sema4a)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 20351
NCBI-ProteinID: NP_001156961
MGI: 107560
Ensembl: ENSMUSG00000028064
UniProt: Q62178
Position
3:complement(88343266..88368500)
AA seq 760 aa
MALPSLGQDSWSLLRVFFFQLFLLPSLPPASGTGGQGPMPRVKYHAGDGHRALSFFQQKG
LRDFDTLLLSDDGNTLYVGAREAVLALNIQNPGIPRLKNMIPWPASERKKTECAFKKKSN
ETQCFNFIRVLVSYNATHLYACGTFAFSPACTFIELQDSLLLPILIDKVMDGKGQSPFDP
VHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHADASFVAAIPST
QVVYFFFEETASEFDFFEELYISRVAQVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLP
FNIIRHAVLLPADSPSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKYKELNKE
TSRWTTYRGSEVSPRPGSCSMGPSSDKALTFMKDHFLMDEHVVGTPLLVKSGVEYTRLAV
ESARGLDGSSHVVMYLGTSTGSLHKAVVPQDSSAYLVEEIQLSPDSEPVRNLQLAPAQGA
VFAGFSGGIWRVPRANCSVYESCVDCVLARDPHCAWDPESRLCSLLSGSTKPWKQDMERG
NPEWVCTRGPMARSPRRQSPPQLIKEVLTVPNSILELPCPHLSALASYHWSHGRAKISEA
SATVYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQPLALDPELAGVPRERV
QVPLTRVGGGASMAAQRSYWPHFLIVTVLLAIVLLGVLTLLLASPLGALRARGKVQGCGM
LPPREKAPLSRDQHLQPSKDHRTSASDVDADNNHLGAEVA
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggccctaccatccctgggccaggactcatggagtctcctgcgtgtttttttcttccaa
ctcttcctgctgccatcactgccacctgcttctgggactggtggtcaggggcccatgccc
agagtcaaataccatgctggagacgggcacagggccctcagcttcttccaacaaaaaggc
ctccgagactttgacacgctgctcctgagtgacgatggcaacactctctatgtgggggct
cgagaggccgtcctggccttgaatatccagaacccaggaatcccaaggctaaagaacatg
ataccctggccagccagtgagagaaaaaagaccgaatgtgcctttaagaagaagagcaat
gagacacagtgtttcaacttcattcgagtcctggtctcttacaatgctactcacctctat
gcctgtgggacctttgccttcagccctgcctgtaccttcattgaactccaagattccctc
ctgttgcccatcttgatagacaaggtcatggacgggaagggccaaagcccctttgaccct
gttcacaagcacacagctgtcttggtcgatgggatgctttattccggcaccatgaacaac
ttcctgggcagcgagcccatcctgatgcggacactgggatcccagcctgttctcaagact
gacatcttcttacgctggctgcacgcggatgcctccttcgtggcagccattccatccacc
caggtcgtctatttcttctttgaggagacagccagcgagtttgacttctttgaagagctg
tatatatccagggtggctcaagtctgcaagaacgacgtgggcggtgaaaagctgctgcag
aagaagtggaccaccttcctcaaagcccagttgctctgcgctcagccagggcagctgcca
ttcaacatcatccgccacgcggtcctgctgcccgccgattctccctctgtttcccgcatc
tacgcagtctttacctcccagtggcaggttggcgggaccaggagctcagcagtctgtgcc
ttctctctcacggacattgagcgagtctttaaagggaagtacaaggagctgaacaaggag
acctcccgctggaccacttaccggggctcagaggtcagcccgaggccaggcagttgctcc
atgggcccctcctctgacaaagccttgaccttcatgaaggaccattttctgatggatgag
cacgtggtaggaacacccctgctggtgaagtctggtgtggagtacacacggcttgctgtg
gagtcagctcggggccttgatgggagcagccatgtggtcatgtatctgggtacctccacg
gggtccctgcacaaggctgtggtgcctcaggacagcagtgcttatctcgtggaggagatt
cagctgagccctgactctgagcctgttcgaaacctgcagctggcccccgcccagggtgca
gtgtttgcaggcttctctggaggcatctggagagttcccagggccaattgcagtgtctac
gagagctgtgtggactgtgtgcttgccagggaccctcactgtgcctgggaccctgaatca
agactctgcagccttctgtctggctctaccaagccttggaagcaggacatggaacgcggc
aacccggagtgggtatgcacccgtggccccatggccaggagcccccggcgtcagagcccc
cctcaactaattaaagaagtcctgacagtccccaactccatcctggagctgccctgcccc
cacctgtcagcactggcctcttaccactggagtcatggccgagccaaaatctcagaagcc
tctgctaccgtctacaatggctccctcttgctgctgccgcaggatggtgtcgggggcctc
taccagtgtgtggcgactgagaacggctactcataccctgtggtctcctattgggtagac
agccaggaccagcccctggcgctggaccctgagctggcgggcgttccccgtgagcgtgtg
caggtcccgctgaccagggtcggaggcggagcttccatggctgcccagcggtcctactgg
ccccattttctcatcgttaccgtcctcctggccatcgtgctcctgggagtgctcactctc
ctcctcgcttccccactgggggcgctgcgggctcggggtaaggttcagggctgtgggatg
ctgccccccagggaaaaggctccactgagcagggaccagcacctccagccctccaaggac
cacaggacctctgccagtgacgtagatgccgacaacaaccatctgggcgccgaagtggct
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (18)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (16)   
DNA sequence (36)   
   RefSeq(nuc) (16)   
   GenBank (10)   
   EMBL (10)   
Protein domain (2)   
   Pfam (2)   
All databases (86)   

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