KEGG   Mus musculus (house mouse): 20423
Entry
20423             CDS       T01002                                 
Symbol
Shh, 9530036O11Rik, Dsh, HHG-1, Hhg1, Hx, Hxl3, M100081, ShhNC
Name
(RefSeq) sonic hedgehog
  KO
K11988  sonic hedgehog
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04340  Hedgehog signaling pathway
mmu04360  Axon guidance
mmu05200  Pathways in cancer
mmu05205  Proteoglycans in cancer
mmu05217  Basal cell carcinoma
mmu05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    20423 (Shh)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    20423 (Shh)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    20423 (Shh)
   05205 Proteoglycans in cancer
    20423 (Shh)
  09162 Cancer: specific types
   05226 Gastric cancer
    20423 (Shh)
   05217 Basal cell carcinoma
    20423 (Shh)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mmu01002]
    20423 (Shh)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    20423 (Shh)
Peptidases and inhibitors [BR:mmu01002]
 Cysteine peptidases
  Family C46: hedgehog family
   20423 (Shh)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Morphogens
   20423 (Shh)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Vint Ribosomal_S6e
Other DBs
NCBI-GeneID: 20423
NCBI-ProteinID: NP_033196
MGI: 98297
Ensembl: ENSMUSG00000002633
UniProt: Q62226
Structure
Position
5:complement(28661838..28672099)
AA seq 437 aa
MLLLLARCFLVILASSLLVCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDFL
TFLDRDEGAKKVFYVIETLEPRERLLLTAAHLLFVAPHNDSGPTPGPSALFASRVRPGQR
VYVVAERGGDRRLLPAAVHSVTLREEEAGAYAPLTAHGTILINRVLASCYAVIEEHSWAH
RAFAPFRLAHALLAALAPARTDGGGGGSIPAAQSATEARGAEPTAGIHWYSQLLYHIGTW
LLDSETMHPLGMAVKSS
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgctgctgctgctggccagatgttttctggtgatccttgcttcctcgctgctggtgtgc
cccgggctggcctgtgggcccggcagggggtttggaaagaggcggcaccccaaaaagctg
acccctttagcctacaagcagtttattcccaacgtagccgagaagaccctaggggccagc
ggcagatatgaagggaagatcacaagaaactccgaacgatttaaggaactcacccccaat
tacaaccccgacatcatatttaaggatgaggaaaacacgggagcagaccggctgatgact
cagaggtgcaaagacaagttaaatgccttggccatctctgtgatgaaccagtggcctgga
gtgaagctgcgagtgaccgagggctgggatgaggacggccatcattcagaggagtctcta
cactatgagggtcgagcagtggacatcaccacgtccgaccgggaccgcagcaagtacggc
atgctggctcgcctggctgtggaagcaggtttcgactgggtctactatgaatccaaagct
cacatccactgttctgtgaaagcagagaactccgtggcggccaaatccggcggctgtttc
ccgggatccgccaccgtgcacctggagcagggcggcaccaagctggtgaaggacttacgt
cccggagaccgcgtgctggcggctgacgaccagggccggctgctgtacagcgacttcctc
accttcctggaccgcgacgaaggcgccaagaaggtcttctacgtgatcgagacgctggag
ccgcgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcacaacgac
tcggggcccacgcccgggccaagcgcgctctttgccagccgcgtgcgccccgggcagcgc
gtgtacgtggtggctgaacgcggcggggaccgccggctgctgcccgccgcggtgcacagc
gtgacgctgcgagaggaggaggcgggcgcgtacgcgccgctcacggcgcacggcaccatt
ctcatcaaccgggtgctcgcctcgtgctacgctgtcatcgaggagcacagctgggcacac
cgggccttcgcgcctttccgcctggcgcacgcgctgctggccgcgctggcacccgcccgc
acggacggcgggggcgggggcagcatccctgcagcgcaatctgcaacggaagcgaggggc
gcggagccgactgcgggcatccactggtactcgcagctgctctaccacattggcacctgg
ctgttggacagcgagaccatgcatcccttgggaatggcggtcaagtccagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (12)   
   RefSeq(nuc) (4)   
   GenBank (4)   
   EMBL (4)   
3D Structure (8)   
   PDB (8)   
Protein domain (5)   
   Pfam (5)   
All databases (54)   

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