KEGG   Mus musculus (house mouse): 207607
Entry
207607            CDS       T01002                                 
Symbol
Ccdc40, B930008I02Rik
Name
(RefSeq) coiled-coil domain containing 40
  KO
K23730  coiled-coil domain-containing protein 40
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    207607 (Ccdc40)
   04990 Domain-containing proteins not elsewhere classified [BR:mmu04990]
    207607 (Ccdc40)
Cilium and associated proteins [BR:mmu03037]
 Motile cilia and associated proteins
  96 nano-molecular ruler
   207607 (Ccdc40)
Domain-containing proteins not elsewhere classified [BR:mmu04990]
 Other domain-containing proteins
  Others
   207607 (Ccdc40)
SSDB
Motif
Pfam: BRE1 DUF6244
Other DBs
NCBI-GeneID: 207607
NCBI-ProteinID: NP_001351696
MGI: 2443893
Ensembl: ENSMUSG00000039963
Position
11:119119328..119156074
AA seq 1262 aa
MAEPEDQADGSQQEGQQSSAEEDSEQQYTEGPEVSPQLEDNGQEIDEGRDPTRSPEEDIT
TEGGGGSEGEMMDAEKVSTDGEAISEGEVGSNGETPPETEVEFIGETAPDTDVEFIGETS
PGTDVEPTGESIQETEVESIGEATPGMDVEPIKKTMTELNVESIGEETSETDVDSIRKAL
RGIDLESITVAYPPKKAKHRKVRPQAEVESTGRAAPEGELEVSDHEKVEALLDELDELSE
IVSSPEVSYSDISPLEMGEDDTNVSATSTDTFQQGIYEPIEPIEPTEPPEPAEPPKPAET
PEDSTVRAPAHPYQRDFPMGARHRFRLSIMGSLTPSDTDDLPLETDEPPQQESVQSTPRA
LEETRIQFLDQVQSLSPEALLDRATEGSDEAEEEGSQLIVLDPDHPLMIRFQEALKGYLN
RQMDKLKLDVQELDVATKQTRSQRQELGVNLYGVQQHLARLQMQLEKSHDRHSLVACERR
RKEEELQCARSVYNKTCQTANEERKKLAALQTEVESLALHLFYMQNIEQDVRDDIQVMKQ
VVRKTETEKMHAEVEKKKQDLFVDQLTERSHQLEENIALFEAQYLSQAEDTRVLKKAVTE
AITEIDTIAVEKKRILQQWTTSLVGMKHRNEAYKTVMDALRECQHQVKSTDSEIEVCKKS
IMQEEEKNEKLARLLNRAETEATLVQKMTAQCLSKQEALQTEFNTYQLALQDTEEMLNKG
YVEHSAVLSELQATRQAFHQEQELRQKMDMSMVDKLQEQGTSSKMTKYFHQLLRKLQKEN
TNLVTHLSKIDGDIAQATLDITNTNCKIDMHKKTLAEMDKEVKRFNDLITNSESEIARRT
ILIERKQSLINFFNKQLEQMVSELGGEEAGPLELEIKRLSKLTEEYNTGVAEAQMTWLRL
QQELVQVTHEREEQLVSVDQLKKEVHIMEQKKLRIESKIAHEKKEQKIVSRHMRDLDNDL
SKLNMLLDKNRCSSEELEQNNIATETEFLRTLKDSERETIQMQEKLMELSEEKATLLNSF
MEAEHQIMLWEKKIQLAKEMRSSVDSETGQTEIRAMKAEIHRMKVRHGQLLKQQEKMIRD
MELAVARRETIVVQAEGQSKIDKKVITKTEFHYQQRELQKKVREMHKATDDCTNTISELE
ETQKFLSSSLQEKQQLLSEMQATTDVLEEEINQLTALKRQNLLEIVTLQTRGKHLQAAIE
GKYVFLHRNSRSQLMERKRLSVRLSQLNKVLSSVQEDYPQYQEVLQSIQQKIATKLETPE
PS
NT seq 3789 nt   +upstreamnt  +downstreamnt
atggcggagccggaggaccaggctgacgggtcacagcaggaaggccaacagtcttctgcc
gaagaggactcggagcagcagtatactgaaggccctgaggtatcaccacagctggaagac
aatggccaagaaattgatgagggcagagaccccaccagaagtcctgaagaggacattaca
actgaaggcgggggcggatctgaaggggaaatgatggatgctgagaaagtcagcacggat
ggggaagccatctctgaaggagaagtggggtccaatggagagactcccccagaaacagaa
gtggaattcattggagagaccgctccagacacagatgtggaattcattggagagacctcc
ccaggaacagacgtggaacccactggagagagcatacaggaaacagaagttgaatccatc
ggagaggctaccccaggaatggacgtggaacccattaaaaagaccatgacagaactcaac
gttgaatccatcggagaagaaacctcagaaacagacgtggactccattaggaaggccctc
cgaggaatagacttggaatctatcacagttgcctatccgccaaaaaaggctaaacacaga
aaggtcagaccccaagcggaagttgaatccactggaagagctgccccagaaggagaatta
gaagtttctgaccacgagaaagtagaagcccttctcgatgagttggatgagctctctgag
atagtcagctctcccgaggtctcctactctgacatcagtcccttggagatgggtgaagat
gacacaaacgtctcagccacatcaaccgacacattccagcaaggcatatatgagcccata
gaacccatagagcccacagagcccccagagcctgcagagcccccaaagcctgcagagacc
ccagaggacagcacggtgagagccccagcgcatccctatcaaagagacttcccaatgggg
gcacgacaccgattcagactgagcatcatgggaagtctgactccctcggacacggacgat
cttcccctggaaacggacgagccgcctcagcaagagtcagtgcagtcaactcccagagcc
cttgaagaaacccggatacagttcctagaccaggtccagagcctcagcccggaggccctg
ctcgatagagcaactgaagggagtgatgaagcagaggaggaaggctcccagctgatcgtg
ctggacccagaccatcctctgatgatcagattccaggaggctctgaagggctacctcaac
cggcagatggacaaactgaagctggacgtccaagagctggatgtggccaccaagcaaacc
cgaagccagaggcaggagctgggcgtgaacctctacggggtccagcagcacctggcccgc
ctgcagatgcagctggagaagagccatgaccggcactctctggtggcctgtgagcggaga
aggaaggaggaggagctgcaatgcgcacgctccgtctacaacaagacctgccagaccgcc
aatgaggaacgaaagaagttggccgccctgcagacagaggtggagagcctggccctgcac
ctcttctacatgcagaacatagagcaggacgtgcgcgatgacatccaagtcatgaagcag
gtggtgaggaagaccgagacggagaagatgcacgccgaggtggagaagaaaaagcaggac
ctgtttgtggaccagctcaccgaaaggtcacaccagctagaagaaaacatcgccctgttt
gaggctcaatacttgtcccaggctgaggacacccgggtcctcaagaaagcagtgactgag
gccatcacagagattgacaccattgccgtggagaagaagcgaatcctacagcagtggacc
accagcctagtgggcatgaagcaccgtaacgaggcatacaagacagtgatggatgcgctc
agggagtgtcagcatcaggtgaagtccaccgacagtgagatcgaagtctgcaagaagtcc
atcatgcaggaggaagagaagaatgagaagctggcccgtctcctgaaccgcgcagagaca
gaagccacactggtgcagaaaatgaccgcccagtgcttaagcaagcaagaggctctgcag
acggagtttaacacgtaccagctcgccctgcaggacacggaggagatgctgaacaagggc
tatgtggaacactcggcagtcttgagcgagctccaggccacacgccaggctttccaccag
gaacaggagctacggcaaaagatggacatgtccatggtggacaagctgcaggaacagggg
acctccagcaagatgaccaagtactttcatcagctccttcggaagctgcaaaaggaaaac
accaacctggtgacacatctttcaaaaattgacggcgatatcgcccaggccaccctggac
atcaccaacaccaactgcaaaatagacatgcataagaagacgctggcagagatggacaag
gaggtaaagaggttcaacgatctcatcaccaacagcgagagcgagatcgcccggcgcacc
atcctcattgagaggaagcagagcctcatcaacttcttcaacaagcagctggaacagatg
gtgtcggagctggggggggaagaagctggacccctggaactggagatcaaaaggctgtcg
aagctgacagaagagtacaacacgggagtggctgaggcgcagatgacctggttgcgcctg
cagcaggaactggtccaggtcacgcatgagcgcgaggagcagctggtgtccgtggaccaa
ctgaagaaggaggtgcacatcatggaacaaaagaagcttcgcatagagagcaagattgca
catgagaagaaggaacaaaagatagtgagccgccacatgagggacctggacaacgacctg
agcaagctcaacatgctgttggacaagaaccgatgcagttcggaagagctggagcagaac
aatatagcaactgagacggagtttctgcgcacgctgaaggactcagaaagagagaccatt
caaatgcaggaaaagctgatggaactctctgaggaaaaggccaccctcctcaacagcttc
atggaggcagagcaccaaatcatgctgtgggagaagaaaatccaactggccaaggagatg
cgcagctcggtggattctgagaccgggcagacagagatccgtgctatgaaggccgagatc
cacaggatgaaggttaggcacgggcagctactgaagcagcaggagaagatgatccgtgac
atggagttggctgtggcccgcagggagaccatcgtcgtccaggctgaagggcagagcaag
atagacaagaaagtaatcaccaagacagagttccactaccagcagcgcgagctgcagaag
aaagtcagggagatgcacaaggccacagatgactgcaccaacaccatctcagaactggaa
gaaactcaaaagttcctaagcagctccctccaggagaagcagcaactgctgtcagaaatg
caggctaccacagatgttcttgaagaggagatcaaccagctaacagctctcaaacggcag
aaccttctggagatcgtgaccctgcagacccgtggcaagcacctgcaggccgccattgag
gggaaatatgtgttcctgcaccgcaacagcaggtcccagctgatggagcgtaagcgcctg
agcgtccggctgtcccagctcaacaaggtcctctccagcgtgcaggaagactacccccag
taccaggaggtgctgcagagcattcaacagaagatcgccaccaagctggagaccccagag
ccctcctag

  All links  
Gene (16)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (21)   
   RefSeq(nuc) (9)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

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