KEGG   Mus musculus (house mouse): 213389
Entry
213389            CDS       T01002                                 
Symbol
Prdm9, Dsbc1, G1-419-29, Meisetz, PRDM9-B, Rcr1, repro7
Name
(RefSeq) PR domain containing 9
  KO
K20796  [histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:2.1.1.354]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu00310  Lysine degradation
mmu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    213389 (Prdm9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    213389 (Prdm9)
   03036 Chromosome and associated proteins [BR:mmu03036]
    213389 (Prdm9)
Enzymes [BR:mmu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.354  [histone H3]-lysine4 N-trimethyltransferase
     213389 (Prdm9)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    213389 (Prdm9)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    213389 (Prdm9)
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     213389 (Prdm9)
SSDB
Motif
Pfam: SSXRD SET zf_PR_Knuckle
Other DBs
NCBI-GeneID: 213389
NCBI-ProteinID: NP_001348365
MGI: 2384854
Ensembl: ENSMUSG00000051977
Position
17:complement(15763334..15784636)
AA seq 283 aa
MPFSGESNVKEGSGIENLLNTSGSEHVQKPVSSLEEGNTSGQHSGKKLKLRKKNVEVKMY
RLRERKGLAYEEVSEPQDDDYLYCEKCQNFFIDSCPNHGPPLFVKDSMVDRGHPNHSVLS
LPPGLRISPSGIPEAGLGVWNEASDLPVGLHFGPYEGQITEDEEAANSGYSWLITKGRNC
YEYVDGQDESQANWMRYVNCARDDEEQNLVAFQYHRKIFYRTCRVIRPGCELLVWYGDEY
GQELGIKWGSKMKKGFTAGRGGHYYDSLKKKEKREFSLRIFIF
NT seq 852 nt   +upstreamnt  +downstreamnt
atgccatttagtggtgaatctaatgtgaaggaagggtctggaatagaaaatttgctgaat
acaagtggctcagaacacgtccagaaaccagtgtcctcccttgaagaaggaaatacctct
ggacagcactctgggaaaaaactgaaacttaggaaaaagaacgttgaagtgaaaatgtac
aggctgcgagagagaaagggccttgcctatgaggaggtcagcgagcctcaggatgatgac
tatctctattgtgagaagtgccagaatttcttcatcgacagttgtcccaaccatgggcct
cctttatttgtaaaagacagtatggtggacagggggcatcccaaccactcagtcctcagt
ctgccccctgggctaagaattagtccatcgggcatccctgaagctggacttggagtatgg
aatgaagcatctgatctaccagtcggtctgcactttggcccctatgagggtcagatcaca
gaggatgaagaggcagccaacagtggttactcctggctgattaccaagggaagaaactgc
tatgagtatgtggatggacaggacgagtcccaagccaactggatgaggtatgtgaactgt
gcccgggatgatgaagagcagaacctggtagcctttcaatatcacaggaaaatcttctat
cgaacctgccgggttatcagaccaggttgtgagcttctggtctggtatggggatgagtac
ggccaggaactgggcattaagtggggaagcaagatgaagaaaggattcacagcaggaaga
ggtgggcactattatgattccttaaaaaagaaagagaagagggaattctccttgagaatt
ttcattttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (50)   
   RefSeq(nuc) (12)   
   GenBank (19)   
   EMBL (19)   
Protein domain (3)   
   Pfam (3)   
All databases (100)   

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