KEGG   Mus musculus (house mouse): 21343
Entry
21343             CDS       T01002                                 
Symbol
Taf6, 80kDa, TAF(II)80, TAFII70, Taf2e, p80
Name
(RefSeq) transcription initiation factor TFIID subunit 6
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    21343 (Taf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    21343 (Taf6)
   03036 Chromosome and associated proteins [BR:mmu03036]
    21343 (Taf6)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     21343 (Taf6)
   Coactivators
    SAGA/TFTC/STAGA complex
     21343 (Taf6)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     21343 (Taf6)
    STAGA complex
     21343 (Taf6)
    TFTC complex
     21343 (Taf6)
    SAGA complex
     21343 (Taf6)
    SLIK complex
     21343 (Taf6)
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa Bromo_TP Histone TFIID-18kDa
Other DBs
NCBI-GeneID: 21343
NCBI-ProteinID: NP_001343529
MGI: 109129
Ensembl: ENSMUSG00000036980
UniProt: Q62311
Position
5:complement(138176879..138185713)
AA seq 678 aa
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRGEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGS
GSVQKYIVVSLPPTGEGKGGPPSHPSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGT
PKANGSQPTGPGSPQPAL
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggccgaggagaagaaactgaaactcagcaatactgtgttgccctctgagtccatgaag
gtggtggcagaatctatgggcattgctcagattcaggaggagacttgccagctactgaca
gatgaggtcagctaccgcatcaaggagattgcccaggatgccctgaagttcatgcacatg
gggaaacgacagaagctcactaccagtgacattgactatgcattgaagttaaagaatgtg
gagccactgtatggcttccatgctcaggagttcatccctttccggtttgcctctggcggg
ggccgggagctgtacttctatgaagagaaggaagtggacctgagtgacatcatcaacacc
cctctgcctcgggtgcctctggatgtctgcctcaaagctcattggctaagcatcgaaggc
tgccagccagctataccagagaatccacccccagctcccaaagagcagcagaaggctgag
gccacagaacccctgaaatcagcaaagccaggccaagaagaagatggacccctgaaaggc
aaaggtcaaggggcagctgcagctgatggcaaaggaaaagagaagaaggcacctcccttg
ctggagggggcccctttccgcctgaagccccgcagcatccatgagctgtctgtggagcag
cagctgtattacaaggagatcacggaagcctgtgtgggatcctgtgaggccaagagagcg
gaagctctgcagagcattgccacggacccagggctctatcagatgctaccacggttcagt
accttcatctcagagggggtccgtgtgaatgtagttcagaataacctggccttgcttatc
tacctgatgcgtatggtgaaggccctgatggacaaccccacactgtatctagagaaatat
gtgcatgagctcattccagcagtaatgacctgcattgtgagtagacagctgtgcttgcgg
ccagatgtggacaatcactgggcactccgggattttgctgcccgtctagtggcccaaatc
tgtaagcatttcagcacaaccaccaacaacatccaatcccgaatcactaagacctttacc
aagagctgggtcgacgagaagactccatggacaactcgatatggctccattgcaggccta
gcagagctgggacatgatgtgattaagacgctaattctgccaaggctgcagcaggaaggg
gaacggatccgcagtgtcttggatgggcctgtgctgagcaacatcgaccgtattggagca
gaccatgtgcagagccttctcctgaaacactgtgccccagtactggccaagctgcgccct
ccacctgacaatcaggatgcctaccggggagaatttgggtcccttgggccccttctctgt
tcccatgtggtgaaggccagggcccaggctgctctacaagctcagcaggtcaacaggacc
acactcaccatcacacagcctcggcccacactgaccctttcacaggcccctcagccaggc
cctcgcacgcctggcttattgaaggtccctggctccattgccttgcctgttcagacactg
gtgtctgcgagagctgctgctcctcctcagccttctcctcctccaaccaagtttattgta
atgtcctcatcttccagtgcctcatcaacccagcaggttctgtccctcagcacctcagct
cctggctcaggctctactactacctctcctgtcaccaccacggttcccagcgtgcagccc
atcgtcaagctggtctccactgctaccactgcacccccaagcacagcccctgctggttct
ggcagtgttcagaaatacattgtggtctctcttcccccaacaggggaaggcaaaggaggc
cctccttctcatccttctccagtccccccttcatcttcttcaccatccccacttggggga
agtaccctctgtggggggaagcaggaagctggggacagcccccctccagctccagggact
ccaaaggctaatggctcgcagcctactggacctggctctccccagcctgctctgtga

  All links  
Gene (14)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (40)   
   RefSeq(nuc) (12)   
   GenBank (14)   
   EMBL (14)   
Protein domain (6)   
   Pfam (6)   
All databases (74)   

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