KEGG   Mus musculus (mouse): 21354
Entry
21354             CDS       T01002                                 

Gene name
Tap1, ABC17, APT1, Abcb, Abcb2, Ham, Ham-, Ham-1, Ham1, MTP, MTP1, PSF, PSF1, RI, RING4, T, TAP, Tap-1, Y3
Definition
(RefSeq) transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
  KO
K05653  ATP-binding cassette, subfamily B (MDR/TAP), member 2
Organism
mmu  Mus musculus (mouse)
Pathway
mmu02010  ABC transporters
mmu04145  Phagosome
mmu04612  Antigen processing and presentation
mmu05163  Human cytomegalovirus infection
mmu05168  Herpes simplex virus 1 infection
mmu05169  Epstein-Barr virus infection
mmu05170  Human immunodeficiency virus 1 infection
mmu05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    21354 (Tap1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    21354 (Tap1)
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    21354 (Tap1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    21354 (Tap1)
   05168 Herpes simplex virus 1 infection
    21354 (Tap1)
   05163 Human cytomegalovirus infection
    21354 (Tap1)
   05169 Epstein-Barr virus infection
    21354 (Tap1)
  09163 Immune disease
   05340 Primary immunodeficiency
    21354 (Tap1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mmu02000]
    21354 (Tap1)
Transporters [BR:mmu02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB2, 3, 8, 9, 10 subgroups
    21354 (Tap1)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 AAA_21 AAA_29 AAA_22 AAA_23 ABC_ATPase AAA_15 AAA_30 NB-ARC SRP54 AAA_18 AAA_33 Zeta_toxin APS_kinase AAA_25
Other DBs
NCBI-GeneID: 21354
NCBI-ProteinID: NP_038711
MGI: 98483
Ensembl: ENSMUSG00000037321
Vega: OTTMUSG00000036473
UniProt: P21958 Q3U6V4
Position
17 B1; 17 17.98 cM
AA seq 724 aa
MAAHVWLAAALLLLVDWLLLRPMLPGIFSLLVPEVPLLRVWVVGLSRWAILGLGVRGVLG
VTAGAHGWLAALQPLVAALSLALPGLALFRELAAWGTLREGDSAGLLYWNSRPDAFAISY
VAALPAAALWHKLGSLWAPSGNRDAGDMLCRMLGFLGPKKRRLYLVLVLLILSCLGEMAI
PFFTGRITDWILQDKTVPSFTRNIWLMSILTIASTALEFASDGIYNITMGHMHGRVHREV
FRAVLRQETGFFLKNPAGSITSRVTEDTANVCESISGTLSLLLWYLGRALCLLVFMFWGS
PYLTLVTLINLPLLFLLPKKLGKVHQSLAVKVQESLAKSTQVALEALSAMPTVRSFANEE
GEAQKFRQKLEEMKTLNKKEALAYVAEVWTTSVSGMLLKVGILYLGGQLVIRGAVSSGNL
VSFVLYQLQFTQAVQVLLSLYPSMQKAVGSSEKIFEYLDRTPCSPLSGSLAPSNMKGLVE
FQDVSFAYPNQPKVQVLQGLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLL
DGQCLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLNRTPTMEEITAVAVESGAHDF
ISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPLLLILDDATSALDAGNQLRVQRL
LYESPKRASRTVLLITQQLSLAEQAHHILFLREGSVGEQGTHLQLMKRGGCYRAMVEALA
APAD
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggctgcgcacgtctggctggcggccgccctgctccttctggtggactggctgctgctg
cggcccatgctcccgggaatcttctccctgttggttcccgaggtgccgctgctccgggtc
tgggtggtgggcctgagtcgctgggccatcctaggactaggggtccgcggggtcctcggg
gtcaccgcaggagcccatggctggctggctgctttgcagccgctggtggccgcactgagt
ttggccctgcctggacttgccttgttccgagagctggccgcctggggaacactccgggag
ggtgacagcgctggattactgtactggaacagtcgtccagatgccttcgctatcagttat
gtggcagcattgcccgcagccgccctgtggcacaagttggggagcctctgggcgcccagc
ggcaacagggacgctggagacatgctgtgtcggatgctgggcttcctgggccctaagaag
agacgtctctacctggttctggttctcttgattctctcttgccttggggaaatggccatt
cccttcttcacgggccgcatcactgactggattcttcaggataagacagttcctagcttc
acccgcaacatatggctcatgtccattctcaccatagccagcacagcgctggagtttgca
agtgatggaatctacaacatcaccatgggacacatgcacggccgtgtgcacagagaggtg
tttcgggccgtccttcgccaggagacagggtttttcctgaagaacccagcaggttccatc
acatctcgggtgactgaggacacagccaacgtgtgcgagtccattagtggcacgctgagc
ctgctgctgtggtacctggggcgagccctgtgtctcttggtgttcatgttttgggggtca
ccgtacctcactctggtcaccctgatcaacctgcccctgctttttcttttgcctaagaag
ctgggaaaagtgcatcagtcactggcagtgaaggtgcaggagtctctagcaaagtccacg
caggtggcccttgaggccttatcggcgatgcctactgtgcggagctttgccaacgaggag
ggtgaggcccagaagttcaggcagaagttggaagaaatgaagactctaaacaagaaggag
gccttggcttacgtggctgaagtctggaccacgagtgtctcgggaatgctgctgaaggtg
ggaattctgtacctgggcgggcagctggtgatcagaggggctgtcagcagcggcaacctt
gtctcattcgttctctaccagcttcagttcacccaggctgttcaggtcctgctctccctc
tacccctccatgcagaaggctgtgggctcctcagagaaaatattcgaatacttggaccgg
actccttgctctccactcagtggctcgttggcaccctcaaacatgaaaggccttgtggag
ttccaagatgtctcttttgcctacccaaaccagcccaaagtccaggtgcttcaggggctg
acgttcaccctgcatcctggaacggtgacagcgttggtgggacccaatggatcagggaag
agcaccgtggctgccctgctgcagaacctgtaccagcccaccgggggccagctgctgctg
gatggccagtgcctggtccagtatgatcaccattacctgcacactcaggtggccgcagtg
ggacaagagccgctgctatttggaagaagctttcgagaaaatattgcgtatggcctgaac
cggactccaaccatggaggaaatcacagctgtggccgtggagtctggagcccacgatttc
atctctgggttccctcagggctatgacacagaggtaggtgagactgggaaccagctgtca
ggaggtcagcgacaggcagtggccttggcccgagccttgatccggaagccactcctgctt
atcttggatgatgccaccagtgccctggatgctggcaaccagctacgggtccagcggctc
ctgtatgagagccccaagcgggcttctcggacggttcttcttatcacccagcagctcagc
ctggcagagcaggcccaccacatcctctttctcagagaaggctctgtcggcgagcagggc
acccacctgcagctcatgaagagaggagggtgctaccgggccatggtagaggctcttgcg
gctcctgcagactga

KEGG   Mus musculus (mouse): 21355
Entry
21355             CDS       T01002                                 

Gene name
Tap2, ABC18, AI462429, APT2, Abcb, Abcb3, Ham, Ham-, Ham-2, Ham2, MTP, MTP2, PS, PSF2, RING11, Tap, Tap-2, Y1, jas
Definition
(RefSeq) transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
  KO
K05654  ATP-binding cassette, subfamily B (MDR/TAP), member 3
Organism
mmu  Mus musculus (mouse)
Pathway
mmu02010  ABC transporters
mmu04145  Phagosome
mmu04612  Antigen processing and presentation
mmu05163  Human cytomegalovirus infection
mmu05168  Herpes simplex virus 1 infection
mmu05169  Epstein-Barr virus infection
mmu05170  Human immunodeficiency virus 1 infection
mmu05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    21355 (Tap2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    21355 (Tap2)
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    21355 (Tap2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    21355 (Tap2)
   05168 Herpes simplex virus 1 infection
    21355 (Tap2)
   05163 Human cytomegalovirus infection
    21355 (Tap2)
   05169 Epstein-Barr virus infection
    21355 (Tap2)
  09163 Immune disease
   05340 Primary immunodeficiency
    21355 (Tap2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mmu02000]
    21355 (Tap2)
Transporters [BR:mmu02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB2, 3, 8, 9, 10 subgroups
    21355 (Tap2)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_22 AAA_29 AAA_30 AAA_21 AAA_16 AAA_23 AAA_25 AAA_15 Zeta_toxin AAA_18 AAA_33 SRP54
Other DBs
NCBI-GeneID: 21355
NCBI-ProteinID: NP_035660
MGI: 98484
Ensembl: ENSMUSG00000024339
Vega: OTTMUSG00000026436
UniProt: P36371 Q792S7
Position
17 B1; 17 17.98 cM
AA seq 702 aa
MALSYLRPWVSLLLADMALLGLLQGSLGNLLPQGLPGLWIEGTLRLGVLWGLLKVGELLG
LVGTLLPLLCLATPLFFSLRALVGGTASTSVVRVASASWGWLLAGYGAVALSWAVWAVLS
PAGVQEKEPGQENRTLMKRLLKLSRPDLPFLIAAFFFLVVAVWGETLIPRYSGRVIDILG
GDFDPDAFASAIFFMCLFSVGSSFSAGCRGGSFLFTMSRINLRIREQLFSSLLRQDLGFF
QETKTGELNSRLSSDTSLMSRWLPFNANILLRSLVKVVGLYFFMLQVSPRLTFLSLLDLP
LTIAAEKVYNPRHQAVLKEIQDAVAKAGQVVREAVGGLQTVRSFGAEEQEVSHYKEALER
CRQLWWRRDLEKDVYLVIRRVMALGMQVLILNCGVQQILAGEVTRGGLLSFLLYQEEVGQ
YVRNLVYMYGDMLSNVGAAEKVFSYLDRKPNLPQPGILAPPWLEGRVEFQDVSFSYPRRP
EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGEPLTEYDHHY
LHRQVVLVGQEPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEMTNGINTEIG
EKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQGDRTMLVIAH
RLHTVQNADQVLVLKQGRLVEHDQLRDGQDVYAHLVQQRLEA
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggcgctgtcctacctgaggccctgggtctctctgctgctggcggacatggctttactt
gggttgctacaaggatctctgggaaatctgcttccccaggggctgccaggactctggata
gagggcaccctgcgacttggagtgctgtggggactgctaaaagtgggagagctgctggga
cttgtggggacccttctgcccttgctctgccttgccactcccctgtttttctcgctaaga
gctctggtgggaggcaccgcgagcacctcagtagtccgagtggcttctgcctcttggggc
tggctgctggctggctatggggctgttgcgctgagctgggccgtgtgggctgtgctgagc
ccggctggagtccaggagaaggaaccaggccaggagaacagaacactgatgaagcggttg
ctgaagctgtccaggccggacctgcctttcctcatagctgccttcttcttccttgtggtg
gctgtgtggggggagacattaatccctcgctattcgggtcgtgtaattgacatcctggga
ggtgatttcgaccccgacgcctttgcaagcgccatctttttcatgtgcctgttctctgtt
gggagctccttctctgcaggctgtagaggaggctccttcctcttcaccatgtccaggatc
aacctgcggatacgagagcagcttttctcatctttgttgcgccaagaccttggattcttc
caggagaccaagacaggggagctgaactcgaggctgagctctgacacctctctgatgagc
cgctggctccctttcaatgccaatatcctgctgcggagcctggtgaaggtggtggggctc
tacttcttcatgctccaggtatcgccccgactcaccttcctctccctgctggacctgccc
ctcacgatagcagctgagaaggtgtacaacccccgccatcaggcggtgctaaaggagatc
caggatgcagtggccaaggcggggcaggtggtgcgcgaggcggtaggagggctgcagact
gtgcgaagctttggggccgaggagcaggaagtcagccactacaaggaggccctggagcga
tgtagacagctgtggtggcgccgagacctggaaaaagacgtgtatctagtcatacggagg
gtgatggccttgggcatgcaggtgctgattctgaactgcggcgtgcagcagattctggct
ggagaggtcacccggggtggcctgctctccttcctgctgtaccaggaggaagtgggacaa
tatgtccggaacctggtttacatgtacggggatatgctgagcaacgtgggcgctgctgaa
aaggtgttttcctacctggaccgaaagccgaatctgccccagcctgggatcctggcccct
ccctggctggaggggcgcgtggaattccaagacgtctccttttcgtatcccaggcgcccc
gagaagcctgtgctccagggtctgacgttcaccctgcatcctggaacggtgacagcgttg
gtgggacccaatggatcagggaagagcaccgtggccgccctgctgcagaacctgtaccag
cccactgggggccagctgctgctggatggcgagcccctgaccgagtatgatcaccactac
ctgcaccgccaggtggttctggtggggcaggagcctgtgctgttctcgggttctgtcaag
gacaatattgcctatggcctgagggactgtgaggacgctcaagtgatggcagctgcccag
gcggcctgtgcagacgacttcataggggaaatgactaatggaataaacacagaaatcggg
gaaaaagggggccagttagctgtgggacagaagcaacgtctggccattgcccgggccctt
gtgcggaacccacgggtcctcatcctggatgaggctaccagcgccctggacgcccagtgt
gaacaggccctacagaactggagatcgcagggggacaggacgatgctggtgattgcccac
aggctgcacacggttcagaatgctgaccaagttctggtgctcaagcagggacgtctggtg
gagcatgaccagctcagggacggccaggatgtctacgcccacctggtacagcagcggctg
gaggcatga

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