KEGG   Mus musculus (house mouse): 214292
Entry
214292            CDS       T01002                                 
Symbol
Syna, Gm453, Gm52, syncytin-A
Name
(RefSeq) syncytin a
  KO
K24396  syncytin-2
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09185 Viral protein families
   03210 Viral fusion proteins [BR:mmu03210]
    214292 (Syna)
Viral fusion proteins [BR:mmu03210]
 Class I fusion proteins
  Metazoa
   214292 (Syna)
SSDB
Motif
Pfam: TLV_coat
Other DBs
NCBI-GeneID: 214292
NCBI-ProteinID: NP_001013773
MGI: 2684898
Ensembl: ENSMUSG00000085957
UniProt: Q5G5D5
Position
5:complement(134586108..134605891)
AA seq 617 aa
MVRPWVFCLLLFPCSSAYSDSWMPLVNLTQHLLQEANSSFSSNCWVCLSIQTQRSLAMPA
PLRTWTETPMKLRIMYSARTLSGPYPITDLERRLQNFQPLTPHSSFVNPDQRAIAFLQIT
SVTGILPILSRITSVRYPDDHVYESAQRPIWGSLSTQTILTSQAPLCISRFFKNSNHATF
VGKLPASLCNHTFQLSPSANHQSIDLSSSYAFAPLMAMPGSKWRNPLRFSGPPSLNSGMP
HYSCPIDDIHCHTYPTTPWRSCPSFPASTCYNLTLFEPDNSSHPITLSVDTTYFKIKLQG
HKDPYPLFQYQPLMGAALSGQYSIWEYEPTVKKNGGITPNIFSHLVSLTYSFCLNSSGVF
FLCGNSTYVCLPANWSGVCTLVFQYPDIELLPNNQTISVPLFATVPSSVPASRRKRALPL
LPLLAGLGIASALGLGIAGITTSTVYFQQLSKALSDSLDEIATSIISLQDQIDSLAGVVL
QNRRALDLIVAERGGTCLFLQEECCFYINQSGVVRHAARKLRERASELGTSSSSWIQWLG
LGPWLPSWLTSLMAPILFILVLLVFRPCLLNCLTHSVSRRMSSFIHTTTEGHVDKILLLR
ESQYKRLPQEPPEEDAV
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggttcgtccttgggttttctgtctcctcctgttcccttgttcctctgcctactcggac
agctggatgcccctggtaaacctcactcaacacctcctccaggaggctaactcttccttc
tcttccaactgctgggtctgcttatccatccaaacccagcgctctctagccatgccagcc
ccactaaggacttggacagagacacccatgaaacttcgaatcatgtactcagcccggacc
ctctccggcccataccctatcaccgaccttgagaggcgcctccagaatttccaaccattg
actccccactcctcttttgtcaaccctgaccagcgggccattgctttccttcagatcacc
agcgtgacaggcatacttcccatactttctcggatcacctcggtgagataccccgatgac
cacgtctatgaatctgcccagcgccccatatggggctcactctccacccagacgatcctc
acctcccaggcccctctctgcatatcccgcttcttcaagaattcaaaccatgccaccttc
gtgggcaaactccctgcctctctttgcaatcacacctttcagctctccccctctgccaac
caccaatccatagatctgtcctccagctatgcattcgccccattaatggccatgccaggg
tctaaatggagaaaccccttacgcttttcaggacccccttccctgaactcagggatgcct
cactactcctgcccgatagatgacatccactgccacacctaccccaccaccccctggagg
tcctgtccttccttcccagctagcacctgctataatctcaccctattcgagccggacaat
tcgagccaccctattaccctgtctgtggacaccacatacttcaagattaaactccaggga
cacaaagacccctatccactctttcagtaccagcccctcatgggggcagccctctctgga
caatattcaatctgggaatatgaacccactgttaagaaaaacggcggtatcactccaaat
atcttctcccaccttgtctccttaacatactccttctgcctcaactcctctggtgttttc
ttcctctgtggaaactcaacttatgtctgtctcccggccaattggtccggcgtctgtacc
cttgtcttccaatacccggatattgaactccttcccaacaaccaaaccatatctgtcccg
ctttttgctacagttccctcctctgtccccgcttctcgccggaagcgagcccttcctctc
cttcctctcctcgcgggcctgggcattgcttctgccctggggttaggcatcgcgggtatc
accacctcaactgtgtatttccaacagctttccaaggctctctcggacagcctagatgaa
atagccacctccatcatcagcctccaagaccaaatagactcgctggcgggtgtcgttctc
caaaaccgcagagctctggacctcattgtggctgagagggggggcacctgcctcttcctc
caggaagagtgctgcttctacataaaccagtccggggtagtccggcacgcggcaaggaaa
cttcgagaaagggcctcggaactcggcacaagctcgagttcttggatccagtggctgggg
ctaggaccctggctgccctcttggttgacttccctcatggctcccattctctttatcctg
gtactgctggttttcaggccttgtcttcttaactgcctgactcattctgtatcgcggcga
atgagttctttcattcacaccaccaccgaaggacacgtggacaagatccttctgcttcga
gagtcccagtacaagagacttccccaagagcccccggaggaggatgccgtctag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (77)   

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