KEGG   Mus musculus (house mouse): 217166
Entry
217166            CDS       T01002                                 
Symbol
Nr1d1, A530070C09Rik
Name
(RefSeq) nuclear receptor subfamily 1, group D, member 1
  KO
K03728  nuclear receptor subfamily 1 group D member 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    217166 (Nr1d1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    217166 (Nr1d1)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mmu03310]
    217166 (Nr1d1)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    217166 (Nr1d1)
Nuclear receptors [BR:mmu03310]
 1. Thyroid hormone like
  1D. Rev-Erb
   217166 (Nr1d1)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 217166
NCBI-ProteinID: NP_663409
MGI: 2444210
Ensembl: ENSMUSG00000020889
UniProt: Q3UV55
Position
11:complement(98658758..98666233)
AA seq 615 aa
MTTLDSNNNTGGVITYIGSSGSSPSRTSPESLYSDSSNGSFQSLTQGCPTYFPPSPTGSL
TQDPARSFGSAPPSLSDDSSPSSASSSSSSSSSSFYNGSPPGSLQVAMEDSSRVSPSKGT
SNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVR
INRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSLCPLET
SPTPHPTSGSMGPSPPPAPAPTPLVGFSQFPQQLTPPRSPSPEPTMEDVISQVARAHREI
FTYAHDKLGTSPGNFNANHASGSPSATTPHRWESQGCPSAPNDNNLLAAQRHNEALNGLR
QGPSSYPPTWPSGPTHHSCHQPNSNGHRLCPTHVYSAPEGEAPANSLRQGNTKNVLLACP
MNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV
LMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGL
FTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPSETSRFTKLLLKLPDLRTLN
NMHSEKLLSFRVDAQ
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgacgaccctggactccaataacaacacaggtggtgttatcacctacattggctctagt
ggctcctccccgagccggaccagcccggagtccctctacagtgacagctccaatggcagc
ttccagtccctgactcaaggttgtcccacatacttcccaccatcacctactggctccctc
acccaggaccctgcccgctcttttggcagtgcgccacccagtctcagtgatgatagctcc
ccttcttctgcatcatcgtcatcctcttcatcctcctcctccttctataacgggagcccc
ccaggaagtctacaagtggccatggaagacagcagccgagtgtcccccagcaagggcaca
agcaacattaccaagctgaatggcatggtgctactgtgtaaggtgtgtggggacgtggcc
tcaggcttccactatggagtgcacgcctgtgagggctgcaagggcttttttcgccggagc
atccaacagaatatccagtacaaacggtgtctgaaaaacgaaaactgctccatcgttcgc
atcaatcgcaaccgctgccagcagtgtcgcttcaagaagtgtctctccgttggcatgtct
agagatgctgtgcgttttgggcgcatccccaagagagagaagcaacggatgcttgccgag
atgcagagcgccatgaacttggccaacaaccaactgagcagcctgtgccctctagagacc
tcacctactccacatcccacctctggctccatgggcccctcacctcctcctgcaccagcc
cccacacctttggtgggcttctctcagttcccacaacagctgacaccacccaggtctccc
agccctgagcccaccatggaggatgtgatatcccaggtcgcccgggcccatcgagaaatc
ttcacctatgcccatgacaagttaggcacctcacctggtaacttcaatgccaatcatgca
tcaggtagcccttcagctacaactccacaccgctgggagagtcagggatgcccgtctgcc
cccaacgacaacaaccttttggcggctcagcgtcataatgaagcgctgaatggtctacgc
cagggcccttcctcctacccgcctacctggccttctggccccacccaccacagctgccac
caacctaacagcaatgggcaccgtctgtgccccacccacgtatattcggccccagaaggg
gaggcacctgccaacagtctacggcaaggcaacaccaagaatgttctgctggcatgtccc
atgaacatgtatccccatggacgcagcggccggactgtgcaggagatctgggaagacttc
tctatgagcttcacgcctgccgttcgggaggtggtagagtttgccaaacacatcccaggc
ttccgtgacctttctcagcacgaccaggtgaccctgcttaaggctggcacctttgaggtg
ctgatggtgcgctttgcatcgttgttcaacgtgaaggaccagacagtgatgttcctgagc
cgcacaacctacagtctgcaggagctcggtgccatgggcatgggcgacctgctcaatgcc
atgtttgacttcagcgagaagctcaactccctggcacttaccgaggaggagctgggccta
ttcaccgcggtggtgcttgtctctgcagaccgctcgggaatggagaattccgcttcggtg
gagcagctccaggagacgctgctgcgggctcttcgggctctggtgctgaagaaccggccc
tcggagacttcccgcttcaccaagctgctgctcaagctgccggacctgcggaccctgaac
aacatgcattccgagaagctgctgtccttccgggtggacgcccagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (31)   
   RefSeq(nuc) (3)   
   GenBank (14)   
   EMBL (14)   
Protein domain (2)   
   Pfam (2)   
All databases (66)   

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