KEGG T01002: 217166

Mus musculus (house mouse): 217166

Entry

217166            CDS       T01002

Symbol

Nr1d1, A530070C09Rik

Name

(RefSeq) nuclear receptor subfamily 1, group D, member 1

K03728

nuclear receptor subfamily 1 group D member 1

Organism

mmu Mus musculus (house mouse)

Pathway

mmu04710

Circadian rhythm

Brite

KEGG Orthology (KO) [BR:mmu00001]
09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    217166 (Nr1d1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    217166 (Nr1d1)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mmu03310]
    217166 (Nr1d1)
Transcription factors [BR:mmu03000]
Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    217166 (Nr1d1)
Nuclear receptors [BR:mmu03310]
1. Thyroid hormone like
  1D. Rev-Erb
   217166 (Nr1d1)

SSDB

Motif

Pfam:

zf-C4 Hormone_recep

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

MGI:

Ensembl:

UniProt:

Position

11:complement(98658758..98666233)

AA seq 615 aa
MTTLDSNNNTGGVITYIGSSGSSPSRTSPESLYSDSSNGSFQSLTQGCPTYFPPSPTGSL
TQDPARSFGSAPPSLSDDSSPSSASSSSSSSSSSFYNGSPPGSLQVAMEDSSRVSPSKGT
SNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVR
INRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSLCPLET
SPTPHPTSGSMGPSPPPAPAPTPLVGFSQFPQQLTPPRSPSPEPTMEDVISQVARAHREI
FTYAHDKLGTSPGNFNANHASGSPSATTPHRWESQGCPSAPNDNNLLAAQRHNEALNGLR
QGPSSYPPTWPSGPTHHSCHQPNSNGHRLCPTHVYSAPEGEAPANSLRQGNTKNVLLACP
MNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEV
LMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGL
FTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPSETSRFTKLLLKLPDLRTLN
NMHSEKLLSFRVDAQ

NT seq 1848 nt +upstreamnt +downstreamnt
atgacgaccctggactccaataacaacacaggtggtgttatcacctacattggctctagt
ggctcctccccgagccggaccagcccggagtccctctacagtgacagctccaatggcagc
ttccagtccctgactcaaggttgtcccacatacttcccaccatcacctactggctccctc
acccaggaccctgcccgctcttttggcagtgcgccacccagtctcagtgatgatagctcc
ccttcttctgcatcatcgtcatcctcttcatcctcctcctccttctataacgggagcccc
ccaggaagtctacaagtggccatggaagacagcagccgagtgtcccccagcaagggcaca
agcaacattaccaagctgaatggcatggtgctactgtgtaaggtgtgtggggacgtggcc
tcaggcttccactatggagtgcacgcctgtgagggctgcaagggcttttttcgccggagc
atccaacagaatatccagtacaaacggtgtctgaaaaacgaaaactgctccatcgttcgc
atcaatcgcaaccgctgccagcagtgtcgcttcaagaagtgtctctccgttggcatgtct
agagatgctgtgcgttttgggcgcatccccaagagagagaagcaacggatgcttgccgag
atgcagagcgccatgaacttggccaacaaccaactgagcagcctgtgccctctagagacc
tcacctactccacatcccacctctggctccatgggcccctcacctcctcctgcaccagcc
cccacacctttggtgggcttctctcagttcccacaacagctgacaccacccaggtctccc
agccctgagcccaccatggaggatgtgatatcccaggtcgcccgggcccatcgagaaatc
ttcacctatgcccatgacaagttaggcacctcacctggtaacttcaatgccaatcatgca
tcaggtagcccttcagctacaactccacaccgctgggagagtcagggatgcccgtctgcc
cccaacgacaacaaccttttggcggctcagcgtcataatgaagcgctgaatggtctacgc
cagggcccttcctcctacccgcctacctggccttctggccccacccaccacagctgccac
caacctaacagcaatgggcaccgtctgtgccccacccacgtatattcggccccagaaggg
gaggcacctgccaacagtctacggcaaggcaacaccaagaatgttctgctggcatgtccc
atgaacatgtatccccatggacgcagcggccggactgtgcaggagatctgggaagacttc
tctatgagcttcacgcctgccgttcgggaggtggtagagtttgccaaacacatcccaggc
ttccgtgacctttctcagcacgaccaggtgaccctgcttaaggctggcacctttgaggtg
ctgatggtgcgctttgcatcgttgttcaacgtgaaggaccagacagtgatgttcctgagc
cgcacaacctacagtctgcaggagctcggtgccatgggcatgggcgacctgctcaatgcc
atgtttgacttcagcgagaagctcaactccctggcacttaccgaggaggagctgggccta
ttcaccgcggtggtgcttgtctctgcagaccgctcgggaatggagaattccgcttcggtg
gagcagctccaggagacgctgctgcgggctcttcgggctctggtgctgaagaaccggccc
tcggagacttcccgcttcaccaagctgctgctcaagctgccggacctgcggaccctgaac
aacatgcattccgagaagctgctgtccttccgggtggacgcccagtga

All links

Gene (22)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (31)   
   RefSeq(nuc) (3)   
   GenBank (14)   
   EMBL (14)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

Download RDF

DBGET integrated database retrieval system