KEGG   Mus musculus (house mouse): 21821
Entry
21821             CDS       T01002                                 
Symbol
Ift88, Tg737, Tg737Rpw, TgN737Rpw, Ttc10, flexo, fxo, orpk, polaris
Name
(RefSeq) intraflagellar transport 88
  KO
K16474  intraflagellar transport protein 88
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    21821 (Ift88)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   21821 (Ift88)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_7 TPR_8 TPR_19 TPR_16 TPR_14 TPR_6 TPR_11 ANAPC3 TPR_10 TPR_17 TPR_CcmH_CycH ARM_TT21_4th TPR_9 ARM_TT21_5th TPR-S ARM_TT21_N TPR_21 RPN7 TPR_15 DUF6584 ARM_TT21_C HEAT_Nup120 HAT_PRP39_C Coatomer_E ARM_TT21_2nd
Other DBs
NCBI-GeneID: 21821
NCBI-ProteinID: NP_033402
MGI: 98715
Ensembl: ENSMUSG00000040040
UniProt: Q61371 G3X9Z7 Q3TUP2
Position
14:57661519..57755393
AA seq 825 aa
MMENVHLAPETDEDDLYSGFNDYNPAYDTEELENDTGFQQAVRTSHGRRPPVTAKIPSTA
VSRPIATGYGSKTSLTSSMGRPMTGTIQDGVARPMTAVRAAGFSKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTSPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMS
MAPSLKAGFNLILSCFAIGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLLIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
SFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEMREQRIKSGRDSSGGSRSKREGSAGSDSGQNNSASSKSERLSAKLRALPGTDEPYESS
GNKEIDASYVDPLGPQIERPKTAAKKRIDEDDFADEELGDDLLPE
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgatggaaaatgttcatctggcaccagaaacagatgaggacgacctttactctggtttc
aacgactacaacccagcctatgatactgaggagttggagaatgacacgggttttcagcaa
gcagtgagaaccagtcatggcagaagacctcccgtaactgctaaaataccaagcacagca
gtcagcagacccatagctactggatatgggtccaagacatccctgacatcatcaatggga
agaccgatgacagggacaattcaggatggagttgctcgaccgatgacagcagtgagagca
gctggcttttccaaggcagctttgcgaggctctgcatttgacccccttggtcagtccagg
ggccctgctcctcctttggaagccaaaaatgaagacagtccagaagaaaaaattagacag
ttggagaagaaagtaaatgagttggtggaagaaagctgtattgccaacagttgtggagac
ttaaaactggccttagagaaggcaaaagatgcaggaagaaaagagagagtcctggtgaga
caacgagagcaagtcacaagtccagaaaatatcaacttggacttaacctactccgttctt
ttcaacttggccagtcagtattctgctaatgaaatgtatgcagaagcactgaacacatac
caagttatagtgaaaaacaagatgtttagcaatgcaggaagactgaaagtgaatatggga
aatatttatttaaagcagagaaattattccaaagccattaagttctaccgaatggcctta
gatcagatcccaagtgtccataaagaaatgaggatcaaaataatgcagaacattggaatc
acatttataaaaactggtcagtactcagatgccatcaactcatttgagcacatcatgagc
atggccccgagcctgaaggcaggcttcaacctcatccttagttgttttgccattggagat
cgggagaaaatgaagaaggcattccaaaaattaattgctgttccgttagaaattgatgaa
gatgataaatatatctccccaagtgatgatccccatactaacttgctgattgaagctata
aaaaatgaccaccttaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtgatcgaagcgtcttttgctgtgggttataac
tggtgtgtggaagtagtgaaagcctctcagtatgtggagctggccaacgacctggagatt
aacaaagcaattacttacttgagacaaaaggactttaaccaagctgtagacacattgaaa
atgtttgagaagaaggacagtagagtgaagagtgcagctgcgaccaacctctcgttcctg
tattatctggaaaacgaatttgcccaagccagcagctatgcagatttagctgtgaactcg
gatagatataacccgtcagctctcactaataaagggaacacagtttttgcaaatggtgat
tatgagaaggcagctgagttctataaagaggccctgagaaacgactcttcctgtactgaa
gcactgtataacattggcctcacctataagaagctgaaccgtctggatgaagccctggac
tccttcctgaaactgcacgcgatccttcggaacagcgctcaagttctttgccagatagca
aacatatatgagttaatggaagatcccaatcaagctattgaatggctgatgcagttgatc
agcgttgttccaactgattcccaagctctgtctaaactgggagagttatacgatagtgag
ggagacaagtcccaggcattccaatattactatgagtcatacaggtatttcccttctaac
attgaagtcattgaatggcttggagcttattacattgatacacagttctgcgagaaagcc
attcagtactttgaaagagcttcccttatacaacccacacaagtgaagtggcagctgatg
gtagctagctgctttagaagaagtggtaactaccaaaaggcattagatacttataaagag
attcacaggaaatttccggagaatgttgaatgtttgcgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgccacaaaactcaagaggttggaaaaaatg
aaagaaatgagggaacagcgcataaaatcgggcagagacagcagcgggggttctcgcagc
aaacgagaggggagtgctggcagtgacagtggccagaacaatagtgccagtagtaagagt
gaacgactgagtgccaagctcagagctttgcctgggacagatgaaccttatgaaagtagc
ggtaacaaagaaatagatgcctcctacgtggatccactgggccctcagatagaaagacca
aaaactgcagccaagaaaagaattgacgaggatgattttgctgatgaagagttaggagat
gacttgctcccagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (12)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (26)   
   RefSeq(nuc) (12)   
   GenBank (7)   
   EMBL (7)   
Protein domain (28)   
   Pfam (28)   
All databases (81)   

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