KEGG   Mus musculus (house mouse): 21960
Entry
21960             CDS       T01002                                 
Symbol
Tnr, J1-tenascin, TN-R, janusin, restrictin
Name
(RefSeq) tenascin R
  KO
K06252  tenascin
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04518  Integrin signaling
mmu05165  Human papillomavirus infection
mmu05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    21960 (Tnr)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    21960 (Tnr)
   04518 Integrin signaling
    21960 (Tnr)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    21960 (Tnr)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    21960 (Tnr)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    21960 (Tnr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    21960 (Tnr)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   21960 (Tnr)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_TEN EGF_Tenascin EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Pur_ac_phosph_N EGF_2 Fn3_VIN3 FN3_Tor_3rd DUF7949
Other DBs
NCBI-GeneID: 21960
NCBI-ProteinID: NP_071707
MGI: 99516
Ensembl: ENSMUSG00000015829
UniProt: Q8BYI9
Position
1:159351170..159759299
AA seq 1358 aa
MGIDGETVVLKNMLIGVNLILLGSMLKPSECRLEVTTERAQRQTVEEEGGASSYNTSSKE
QPMVFNHVYNINVPLESLCSSGLEASAEQDMSAEDDTLAEYIGQTSDHESQVTFTHKINL
PKKACPCASSSQVLQELLSRIEMLEREVSLLRDQCNTNCCQESAATGQLDYVPHCSGHGN
FSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGYAGEDCSQRRCLNA
CSGRGHCQEGLCICEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTIMELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESEASSTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGT
EYGVGISAVMNSKQSIPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDKEEDMLEVLLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKNITISNVTKDSLTVSWSSPVAPFDYYRVSYRP
TQVGRLDSSVVPNTVTEFAITRLYPATEYEISLNSVRGREESERICTLVHTAMDSPMDLI
ATNITPTEALLQWKAPMGEVENYVIVLTHFAIAGETILVDGVSEEFQLVDLLPSTHYTVT
MYATSGPLMSGTIATNFSTLLDPPDNLTASEVTRQSALISWQPPRAAIENYVLTYKSTDG
SRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQEATRSSLTSTVFTTGGRVFSHPQDCAQ
HLMNGDTLSGVYTIFLNGELSHKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVG
FGNLEDEFWLGLDNIHRITAQGRYELRVDMRDGQEAVFAYYDKFAVEDSRSLYKIRIGSY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYIHRLTAGRKRRALKF
NT seq 4077 nt   +upstreamnt  +downstreamnt
atggggatcgatggggaaacagtagtcttgaagaacatgctcattggtgtaaacctgatc
ctgttgggatccatgctcaagccttctgagtgtcggctggaggtgactacagaaagggct
cagagacaaactgtggaggaggaaggaggggcttccagctacaatacttccagcaaggaa
cagcctatggtcttcaaccatgtgtataacatcaacgtgccacttgaaagcctctgctcc
tcggggctggaggcctcagctgagcaggacatgagtgctgaagatgatactctggccgaa
tacataggccaaacctcagaccatgaaagccaggttaccttcacccacaagatcaacctc
cccaaaaaagcctgcccatgtgcaagctcttcccaggtactgcaggaactgctgagccgg
atcgagatgctggagagggaggtgtccttgctgcgagaccagtgcaataccaactgctgt
caggaaagcgctgccacaggacaactggactatgtccctcactgcagcggccatggcaac
tttagcttcgagtcctgtggctgcatctgcaatgaaggctggtttggcaagaactgctca
gagccctactgcccactgggctgctccagtcggggtgtgtgtgtcgatggccagtgcatt
tgtgacagtgaatacagcggagatgactgttcagagctccggtgcccaacagactgcagt
tcccgagggctctgtgtggatggggaatgtgtctgtgaagagccctacacaggcgaggac
tgcagggagctgcgctgccctggggactgttcagggaaggggcaatgtgccaatggtacc
tgcctgtgccaagagggctatgctggtgaggactgcagccagcgacggtgtctgaatgcc
tgcagtgggcgaggtcactgccaggaggggctctgcatctgtgaggaaggctaccagggc
cctgactgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggccttcagctccagcagcgggtgcctggagattggagtggtgtc
accatcatggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccactcatctctccactcctcaaggg
ctacagttcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctctttc
tccttcgacgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgct
cagctccccagcgatgtgacgtcctttaaccagacaggactgaaacctggggaggagtac
attgtgaatgttgtggctctaaaggaacaagcccggagccctcctacctctgccagcgtc
tccactgtcattgacgggcccacacagatcctggttcgagatgtctctgatactgtggct
tttgtggaatggaccccacctcgagccaaagttgatttcattcttttaaaatatggcttg
gtgggtggcgaaggcgggaagacgaccttccggctgcagcctcccttaagccagtactcc
gtgcaagcccttagacctggctcgcgctacgaggtgtccatcagcgcagtccgggggacc
aatgagagtgaagcctcaagcacccaatttacaacagagattgatgctcccaagaatttg
cgagtgggttcccgcacagcaactagccttgacctggaatgggataacagcgaggccgaa
gctcaggagtacaaggttgtgtacagcaccttagctggtgaacagtaccacgaagtgctg
gtacccaagggcattggcccaactaccaagactaccctcacagatctggttccaggcaca
gagtatggagttggaatatctgcagtaatgaactcaaaacaaagcattcctgccactatg
aatgccaggactgaacttgacagtccccgagacctcatggtaacagcctcctcagagacc
tctatctctctcatctggaccaaggccagtggtcccattgatcactacagaattactttt
accccatcttctgggatctcctccgaagtcactgtgcccagggataggacttcatacaca
ctaacagatctagagcctggagcagaatacattatctccatcactgctgagaggggtcgg
cagcagagcctggagtctactgtggatgccttcacaggcttccgccctatctcccatttg
cacttttctcatgtgacctcctccagtgtcaatatcacctggagtgacccatctccccca
gcagacagactcattctgaactacagccccagggacaaagaggaagacatgttggaggtc
ctcttggatgccaccaagaggcacgctgtcttgatgggtctacagccagccactgaatat
atagtgaaccttgtagctgtccatgggacggtaacctctgaacccatagtgggttctatc
actacaggaattgatcctcccaaaaacatcacaattagcaacgtgactaaggactccctg
acggtgtcctggagctctcctgttgcgccttttgattactaccgagtatcgtaccgaccc
acccaagtgggacggctagacagctccgtagtgcccaacaccgtgacagagttcgccatc
accaggctgtatccagctactgaatatgaaataagcctcaacagtgtacggggcagggag
gagagtgaacgcatctgcaccctggtgcacacagccatggatagccccatggatttgatc
gctaccaacatcacacctacagaagccttgctccagtggaaagcacccatgggtgaagtg
gaaaattatgtcatcgtcctcacacactttgcaattgctggagagaccatcctggttgac
ggggtcagcgaagaattccagcttgtagacttgcttcctagcacccactacactgtcact
atgtatgccaccagtgggcctctcatgagtggcaccattgccaccaacttctccaccctc
ctggaccctcctgacaacctgacagccagtgaagtcaccaggcaaagcgcactgatctcc
tggcagccgcccagagctgcgattgaaaactatgtcttgacatacaagtccaccgatgga
agccgcaaagagctgatagtggatgctgaggacacctggatccgactagagggcctgtca
gagaacacagactacacagtgctcctgcaggcagcccaggaggccacaaggagcagtctc
acctctactgtctttaccacagggggccgggtgttctctcatcctcaagactgtgcccag
catttgatgaatggagacactctgagtggcgtttacaccatcttcctcaatggggagcta
agccacaagctgcaagtgtactgtgacatgaccacagatgggggcggctggattgtattc
cagaggcggcaaaatggacaaactgattttttccggaaatgggcagattatcgtgttggc
tttgggaatctggaggatgagttttggctagggctagacaacatccacaggataacagcc
cagggccgctatgagctgcgtgtggatatgcgggatggacaggaagcagtctttgcctac
tatgacaagttcgctgtggaggacagcagaagcctgtacaagatccgcataggaagttac
aatggcactgcaggagactccctcagctatcaccagggacgtcctttctccactgaggac
agagacaatgatgttgcagtcaccaactgtgccatgtcctacaagggtgcttggtggtat
aagaactgccaccggaccaacctcaacgggaagtacggggagtccaggcacagtcagggg
atcaactggtaccattggaaaggccatgaattctccatcccctttgtagaaatgaagatg
aggccctacatccatcgtctcacagccgggaggaaacggcgagccttgaaattctga

  All links  
Gene (21)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (15)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (25)   
   RefSeq(nuc) (13)   
   GenBank (6)   
   EMBL (6)   
Protein domain (12)   
   Pfam (12)   
All databases (73)   

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