KEGG   Mus musculus (house mouse): 226026
Entry
226026            CDS       T01002                                 
Symbol
Smc5, MLZ-453, SMC-5, Smc5l1, mKIAA0594, mSMC5
Name
(RefSeq) structural maintenance of chromosomes 5
  KO
K22803  structural maintenance of chromosomes protein 5
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    226026 (Smc5)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     226026 (Smc5)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_25 AAA_29 KH_5 SMC_hinge FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 226026
NCBI-ProteinID: NP_001239613
MGI: 2385088
Ensembl: ENSMUSG00000024943
UniProt: Q8CG46
Position
19:complement(23183817..23251286)
AA seq 1101 aa
MATPSGKAAPPNPQVSKRSLPRDASSEVPSKRKNSNPLPTLPRPSGTFVEGSIVRIAMEN
FLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSK
GLVEIELFRTSGNLIITREIDVIKNQSFWFINKKPVTQKIVEEQVAALNIQVGNLCQFLP
QDKVGEFAKLSKIELLEATEKSVGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLEKMV
QRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGVKLIRDRVKEEVRKLK
EGQIPMTRRIEEIDRQRHTLEVRIKEKSTDIKEASQKCKQRQDLIERKDRQIKELQQALT
VKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQIDTVTNDLRRVQEEKALCEGE
IIDKQREKEMLEKQRRSVSDHITRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDRFKQR
VCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDMEIFLREVRDNKKLRVNAVIA
PKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERI
ERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLK
EMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKELLERKTRKRQLEQKISSKLASIRL
MEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSFQIQKVDLILQNTTVISE
KNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCKELMKKARQVCNLSADQAVPQEFQ
TQVPTIPNGHSSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPSVVEEYSKREVEI
QQLTEELQGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHT
ENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDE
INQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEP
NRWNLKAFQRRRRRITFTQPQ
NT seq 3306 nt   +upstreamnt  +downstreamnt
atggcgactccgagcgggaaggctgctccccccaacccccaggtttccaagcggtctctc
ccgagagatgcttcctccgaggtcccgagcaagagaaagaactcgaacccgttgccgacg
ctgccgcggccgtccgggaccttcgtcgagggctcaatcgtccgcatcgccatggagaac
ttcttaacatatgacatctgtgaagtgtctcctgggccccatctgaacatgatcattgga
gccaatggaacagggaagtcaagcatcgtgtgtgccatttgcctcggactcgcaggcaaa
cctgctttcatgggacgtgcagataaggttgggtttttcgtgaagagaggatgttccaaa
ggtttggttgaaattgaactgttcaggacttctggaaatcttataatcacccgcgagatt
gatgtgataaaaaatcagtccttttggttcatcaacaaaaagcctgtaacccagaagata
gtggaagaacaggttgcagccttaaacatccaagtgggcaatctgtgccagttcttgcct
caggacaaagttggggaatttgctaaactcagcaaaattgaactccttgaagctactgag
aagtcagttggtcctccagagatgcacagataccactgtgaactcaaaaacttcagggag
aaggagaagcagctagagacctcttgcaaagagaaaactgaatacctagagaaaatggtt
cagagaaatgaaaggtacaaacaagatgtggaaagattctatgaacgaaaacgacattta
gatttaattgagatgcttgaggccaaaagaccatgggtggaatatgagaatgtacgtcag
gaatatgaaggtgtgaaactaattcgtgaccgagtgaaggaagaggtcaggaaacttaaa
gaagggcagattcctatgacacggcggattgaggagattgaccggcagcgtcacactttg
gaagttcgaatcaaagaaaagtcaaccgatattaaggaagcatctcagaaatgcaagcaa
aggcaagacttgattgaacggaaggacagacagattaaggaacttcagcaggcattaaca
gtcaagcagaatgaagagctggaccggcagaagagaataagtaacacccgcaagatgata
gaggatctgcagagtgagctcaagactgcggaaaactgcgagaaccttcagcctcagatc
gacaccgtcacaaatgatctgaggcgtgtgcaggaggagaaagccttatgtgaaggcgag
atcattgataaacagcgagaaaaggaaatgctggagaagcagagacggagtgtgagtgat
catattacacggtttgacaatcttatgaatcagaaggaagataagctgagacagcggtac
cgggatacgtatgatgcagtcttgtggctgagaaataacagagacaggtttaaacaaaga
gtctgtgaacccataatgctcacgattaatatgaaagataataaaaatgcaaaatatgtt
gaaaatcatatttcatcaaatgacttaagagcctttgtgtttgaaagtcaagaagatatg
gagattttcctcagagaggttcgtgacaacaagaagttaagagtaaatgctgttattgcc
cccaagatctcatatgcagacaaagccccttcaagatctctgaatgacttaaaacaatat
ggatttttttcatatcttcgggagttatttgatgcacctgatcctgtgatgagttacctt
tgctgccagtatcatattcatgaggttcctgtgggaactgaaaggacccgagaaagaatt
gaacgggtaatacaagaaactcgattaaaacaaatttatacagcagaagaaaagtatgtg
ttaaaaacttctgtgtattcaaataaagttatttctagtaatacatccctgaaagtagcc
cagttcctcactgttactgtggatctagagcaaagaagacacttggaagagcagctaaag
gaaatgaatagacaactggaagcagtggactcagggttggctgccttgcgtgatacgaac
aggcaccttgagctcaaagacaacgagctaaggctgaagaagaaggagcttcttgaaaga
aaaaccaggaaaaggcagctggagcagaaaatcagctccaagctggcaagtataaggctg
atggaacaggatacttgcaatctggaagaggaagaacgaaaagcaagtaccaaaataaaa
gaaataaatgttcagaaagcaaaacttgttactgaattaacaggccttgtaaagatatgc
acttcttttcaaattcaaaaagttgatttgattcttcaaaatactacagtgatctctgag
aagaacaagttagaagcagattacatggcgtcatcttcccagctgcgcgtcacagaacaa
caattcattgaattggatgacaacagacagagattgttacagaagtgcaaggaacttatg
aagaaagctaggcaagtatgcaacctgagtgctgaccaagctgttccacaagaattccag
acacaagtacccaccattccaaatggacacagctcctcaccccccatggcttttcaagat
ctcccaaacacattggatgaaatcgatgcattattaactgaagaaaggtcaagagcttcg
tgcttcacaggactgaatccttcggtggttgaggagtactcaaaaagagaagtagaaata
cagcagttgaccgaagaactgcaggggaagaaagttgaactagatgaatacagggaaaac
atttcgcaggtgaaagaaaggtggctgaaccccttaaaggagctagtagaaaaaattaat
gagaaattcagcaacttttttagttccatgcagtgtgctggtgaagttgatcttcataca
gaaaatgaggaagattatgataaatatggaatccggattagagtaaaatttcgcagtagt
actcagctgcatgaattaactcctcatcatcaaagtggaggtgaaagaagtgtttctact
atgctatacttgatggcacttcaggagcttaacagatgtccgttcagagtagtcgatgaa
attaatcagggtatggacccaattaatgaacggagagtatttgaaatggttgtgaacact
gcctgtaaagagaacacatcccagtatttcttcatcacaccgaagcttctacagaatctt
ccttattctgaaaagatgacagtgttgtttgtctacaatggtcctcatatgctggagcca
aaccgatggaatttaaaggcttttcaaaggcgtcggcgaaggataacctttactcaacct
cagtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (23)   
   RefSeq(nuc) (7)   
   GenBank (8)   
   EMBL (8)   
Protein domain (9)   
   Pfam (9)   
All databases (83)   

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