KEGG   Mus musculus (house mouse): 226182
Entry
226182            CDS       T01002                                 
Symbol
Taf5, 6330528C20Rik
Name
(RefSeq) TATA-box binding protein associated factor 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    226182 (Taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    226182 (Taf5)
   03036 Chromosome and associated proteins [BR:mmu03036]
    226182 (Taf5)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     226182 (Taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     226182 (Taf5)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     226182 (Taf5)
    STAGA complex
     226182 (Taf5)
    TFTC complex
     226182 (Taf5)
    SAGA complex
     226182 (Taf5)
    SLIK complex
     226182 (Taf5)
SSDB
Motif
Pfam: WD40 TFIID_NTD2 NBCH_WD40 ANAPC4_WD40 Nup160 RAB3GAP2_N CDK5RAP3 eIF2A Cytochrom_D1 ABM-like PROPPIN
Other DBs
NCBI-GeneID: 226182
NCBI-ProteinID: NP_796316
MGI: 2442144
Ensembl: ENSMUSG00000025049
UniProt: Q8C092 F8VPY2
Position
19:47056187..47071918
AA seq 801 aa
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTPNNGPNGGGGGNVAVAAAAGG
DGGTPKPGVAVSAAAPAGAAPVPAAPAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGSGAPGELDGAGAEAASALLSRVTASVPGSAAPEPPGTGASVTSVFSGSAS
GPAAPGKVASVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq 2406 nt   +upstreamnt  +downstreamnt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctacctccgcaggctggcgacggcgcaggcgaggggagcggcggcactccc
aacaacggccccaacggcggcggcggcgggaatgtggcagtggcagcggcggccggcggg
gacggcgggacccccaagcctggggtggctgtctccgccgctgccccggcgggggcggcc
ccggtgcccgccgctccggcggaggccggcgctccccacgaccgacagaccctcctggcc
gtgctgcaattcctccggcagagcaacctccgcgaggccgaagaggcgctgcgccgggag
gcccggctgctggaggaggcggtggcgggctccggagctccgggagagttggacggggcc
ggcgcggaggcggccagcgcgcttctcagccgggtcaccgcttcagttcccggctctgcg
gcccccgagcctccggggacgggcgcctcggtgacctcggtgttctcgggttcagcctca
ggtcctgcggctccgggaaaggttgcaagtgtagctgtggaagaccagccagacgtcagt
gctgtcttgtcggcctacaaccaacaaggagaccctacaatgtatgaagaatactacagt
ggactgaaacacttcattgaatgttctctggactgccatcgagcagagttatcccaactc
ttttatcctctgtttgtacatatgtacttggagctagtttataatcaacatgaaaatgaa
gcaaaatcattctttgagaagttccatggagatcaggaatgttactaccaggatgaccta
cgagtgttatctagtcttaccaaaaaggagcacatgaaagggaacgagaccatgctggac
tttcggacgagtaaattcgttctccgcatttcccgggactcgtaccagctcttgaagcgg
catctccaggagaagcagaacaatcagatctggaacatcgtgcaggagcacctctacatc
gacatcttcgacgggatgcctcgcagtaagcaacagatcgacgccatggtgggcagcctg
gcaggagaggcgaaacgagaggcgaacaaatcgaaggtattttttggtttactaaaagaa
ccagaaattgaggtgcctttggatgatgaggacgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaagcctaagaaggatagtattggctctaaaagcaaaaaacaagatccc
aatgccccgcctcaaaacagaattcctcttcctgagttaaaagattcagacaaactggac
aaaataatgaatatgaaagaaactaccaaacgagtgcgcctcgggccagactgtttaccc
tccatttgtttctatacattccttaatgcttaccagggcctcactgcagtggatgtcact
gatgactctagtctgattgctggaggttttgctgattcaactgtcagagtgtggtctgtg
acccctaaaaagcttcgtagtgtcaaacaagcatcagatcttagtcttatagacaaagaa
tcagatgatgtcttagagagaatcatggatgagaaaactgcaagtgagttgaagattttg
tatggtcacagtgggcctgtctatggagccagcttcagtccggataggaactacctactc
tcctcttcagaggatggaactgttagactctggagccttcagactttcacttgcttggtt
gggtataaaggacacaactacccagtatgggacacacagttttctccatacggatattat
ttcgtgtcaggaggccatgaccgagtagctcggctttgggctaccgatcactatcagcct
ttgaggatatttgctggccatcttgctgatgtgaattgcactagatttcatccaaattcg
aactatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctcaatggt
aactgtgtaagaatcttcactgggcacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacagatggcagagtacttctttgggatattgga
cacggcttgatggttggagaattaaaaggccacactgatacagtgtgttcacttaggttt
agtagagatggtgaaattttggcatcaggttcaatggataatacagtccggttatgggac
gccgtcaaagcgtttgaagacttagagactgatgactttactacagccaccgggcatata
aacctacctgagaattcccaggagttgttattgggtacatatatgaccaaatcaacacca
gttgtacacctacattttacaagaagaaacttggttctagctgcaggagcttacagtccg
caataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (11)   
   Pfam (11)   
All databases (50)   

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