KEGG   Mus musculus (house mouse): 227606
Entry
227606            CDS       T01002                                 
Symbol
Tbpl2, Gm348, Trf3
Name
(RefSeq) TATA box binding protein like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03022  Basal transcription factors
mmu05016  Huntington disease
mmu05017  Spinocerebellar ataxia
mmu05165  Human papillomavirus infection
mmu05166  Human T-cell leukemia virus 1 infection
mmu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    227606 (Tbpl2)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    227606 (Tbpl2)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    227606 (Tbpl2)
   05165 Human papillomavirus infection
    227606 (Tbpl2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    227606 (Tbpl2)
   05017 Spinocerebellar ataxia
    227606 (Tbpl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    227606 (Tbpl2)
   03021 Transcription machinery [BR:mmu03021]
    227606 (Tbpl2)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    227606 (Tbpl2)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     227606 (Tbpl2)
  RNA polymerase III system
    TFIIIB
     227606 (Tbpl2)
  RNA polymerase I system
    SL1/TIF-1B
     227606 (Tbpl2)
SSDB
Motif
Pfam: TBP DUF3378 U1snRNP70_N
Other DBs
NCBI-GeneID: 227606
NCBI-ProteinID: NP_951014
MGI: 2684058
Ensembl: ENSMUSG00000061809
UniProt: Q6SJ95
Position
2:complement(23961378..23986607)
AA seq 350 aa
MVGSLIMEEDIYLDLFLDPYTIQDDFPPAMSQLFSPGVPLDMHSLPSNPETVFHPHLGGV
KKASTDFSSVDLSFLPDELTQENRDQTVTGNKLASEESCRTRDRQSQLQLPDEHGSELNL
NSNSSPDPQSCLCFDDAHSNQPSPETPNSNALPVALIASMMPMNPVPGFSGIVPQLQNVV
STANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVVCTGAKSEEE
SRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQFSSSYEPELF
PGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKV
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggtgggctctctcatcatggaggaggacatatacctggacctcttcctggatccttat
accatccaggatgactttcctccagctatgtctcaactgttcagcccaggagtgccttta
gacatgcactcacttccatctaatccagagactgtgtttcatccacatcttggtggagtc
aaaaaggcatccactgacttttcatctgtggatctaagcttcttaccagatgaacttacc
caagaaaatagagaccaaactgtcactggaaacaagctggcaagtgaggaaagctgtagg
actcgagatcgacaaagtcagttgcagttgcccgatgaacatggcagtgagctgaacttg
aatagcaacagttcaccagatccccagtcatgcctgtgctttgatgatgctcactccaac
cagccctctccagaaacaccaaactccaatgccttacctgtggcattgatagcatccatg
atgccaatgaaccctgttccaggattttctggaattgtgcctcaattacagaatgtagtt
tccactgcaaatctggcctgtaaattggatctgagaaaaatagccctgaatgccaaaaac
acagaatataacccaaagaggtttgctgcagtaataatgaggatccgagagccaaggaca
acagctctcatctttagctctgggaaagtggtctgtacaggagccaaaagtgaagaggag
tctcggctggcagcgagaaagtatgctcgtgtggtgcagaagctcgggttccctgtcaga
ttcttcaattttaaaattcagaacatggttggaagctgtgatgtgaaatttcccatcagg
ctggagattttggcactaacccatcggcagttcagtagcagttatgaacctgaacttttc
cccggccttatttataagatggtaaaaccacaggttgtgttgctaatctttgcatctgga
aaagttgtgttaacaggtgccaaagagcgttctgagatctatgaagcatttgaaaacatg
tatcctattctagaaagttttaagaaagtctga

  All links  
Gene (33)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (55)   

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