KEGG T01002: 227648

Mus musculus (house mouse): 227648

Entry

227648            CDS       T01002

Symbol

Sec16a, C230052J16Rik, p250

Name

(RefSeq) SEC16 homolog A, endoplasmic reticulum export factor

K20353

COPII coat assembly protein SEC16

Organism

mmu Mus musculus (house mouse)

Brite

KEGG Orthology (KO) [BR:mmu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    227648 (Sec16a)
Membrane trafficking [BR:mmu04131]
Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    227648 (Sec16a)

SSDB

Motif

Pfam:

TPR_Sec16 Sec16

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

MGI:

Ensembl:

UniProt:

Position

2:complement(26299443..26336138)

AA seq 2357 aa
MQPPPQAVPSGVAGPPPAGNPRSMFWANSPYRKPANNAPVAPITRPLQPVTDPFAFNRQT
LQNTPVGSSSKSSLPNLPGPALSVFSQWPGLPVTPTNAGDSSTGLHEPLSGTLSQPRADA
SLFPPASTPSSLPGLEVSRNAEADPSSGHEVQMLPHSAHYIPGVGPEQPLGGQMNDSGSG
PDQPMNRHAPHDGAVTHAASPFLPQPQMPGQWGPAQGGPQPSYQHHSPYLEGPVQNMGLQ
AASLPHFPPPSSLHQGPGHESHAPQTFTPASLASGEGNEIVHQQSKNHPLSSFPPKHTFE
QNSRIGNMWASPELKQNPGVNKEHLLDPAHVNPFTQGNSPENQAHHPPVAATNHALQEAA
SGALSMFFQGEETENEENLSSEKAGLDKRLNLDSFSSTSRLGHPPPPGASGVYQAFPRGP
SSEAAQEGDAQPYFSQSVGVRLDKQSTVPPANDAWGDVPGTGTRCASGPQCENVENLEFV
QNQEVLPRETLSVDPFPLSDQIRYGPLPGPAASRPATVGLTRGGGLNLEAPDTPLHPTRP
DSVSSSYSSHSHRSPPGSARPQELVGTFIQQEVGKLEDDTSGSFFKQIDSSPVGGETDEV
TGSQNCCSSLSQPSTPSPPKPTGVFQTSANSSFEPVKSHLVGVKPVEADRANMVVEVRGT
QYCPKKRRAAVAPPDATSGNLEQPPDNMETPCAPQACPLPLSTTGEAGQLVSNTAGTPLD
TVRPVPDKRPSARAQGPVKCESPATTLWAQNELPDFGGNVLLAPAAPALYVPVKPKPSEV
VHHPEKGMSGQKAWKQGSVPPLQNQDPPGASENLENPPKVGEEEALPVQASSGYASLLSS
PPTESLHNQPVLIAQPDQSYNLAQPINFSVSLLNPNEKNQSWGDAVVGERSIVSNNWALG
GDPEERAALSGVPASAVTGASLPSSIPQNCAPQGSGSSEMIASQSASWLVQQLSPQTPQS
PHPNAEKGPSEFVSSPAGNTSVMLVPPASSTLVPNSNKAKHSSNQEEAVGALDFTLNRTL
ENPVRMYSPSPSDGPASQQPLPNHPRQSGPGLHNQDHFYQQVTKDAQDQHRLERAQPELV
PPRPQNSPQVPQASCPEPSNPESPPTQGQSESLAQPPASPASVNTGQLLPQPPQASSASV
TSTNSSQAAVRSEQLWLHPPPPNTFGPAPQDLASYYYYRPLYDAYQSQYPSPYPSDPGTA
SLYYQDMYGLYEPRYRPYDSSASAYAENHRYSEPERPSSRASHYSDQLAPRQGYPEGYYN
SKSGWSSHSDYYANYYSGQYDYGDPSRWDRYYGSRLRDPRTWDRRYWYDSEHDPYRKDHY
AYSDRPEKCDDHWRYDPRFTGSFDDDAEIHRDPYGEEADRRSIHSEHSARSLRSTHSLPS
RRSSLSSHSHQSQIYRSHHVTGGSFEAPHAPGSFHGDYAYGTYASNFSGAHGFPEYSYPA
DTSWPAVEQVPSRPTSPEKFTVPHVCARFGPGGQLLKVIPNLPSEGQPALVEIHSLETLL
QHTPEQEEMRSFPGPLGKDDTHKVDVINFAQNKATKCLQNESLIDKESASLLWKFIILLC
RQNGTVVGTDIAELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLTD
SQTVTTSVLEKETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRF
ANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMAT
MGDTLASKGLLDAAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTEA
YEYAQSLGAHTCSLPNFQVFKFIYLCRLAEMGLATQAFHYCEVIAKSVLTQPGAYSPVLI
SQLTQMASQLRLFDPQLKEKPEEESFVEPAWLVQLQHVERQIQEGTVLWSQDGTEPQQCR
ITSGSEVEQSDGPGLNQQAGPQADNPLLMPSTEPLMHGVQLLPTAPQTLPDGQPAHLSRV
PMFPVPMSRGPLELSPAYGPPGSALGFPESSRSDPAVLHPGQALPPTTLSLQESGLPPQE
AKSPDPEMVPRGSPVRHSPPELSQEEFGESFADPGSSRTAQDLETSPVWDLGSSSLTRAP
SLTSDSEGKKPAQAVKKEPKEPKKTESWFSRWLPGKKRTEAYLPDDKNKSIVWDEKKNQW
VNLNEPEEEKKAPPPPPTSFPRVPQVAPTGPAGPPTASVNVFSRKAGGSRARYVDVLNPS
GTQRSEPALAPADFFAPLAPLPIPSNLFVPNPDAEEPQPADGTGCRGQAPAGTQSKAEST
LEPKVGSSTVSAPGPELLPSKPDGSQGGEAPGDHCPTGAPHGGSVPFYNPAQLVQASVTS
GNSRPGRIGQRKYAALN

NT seq 7074 nt +upstreamnt +downstreamnt
atgcagccaccacctcaggcagtcccgtctggggtggctggaccacccccagctgggaat
cctcggagcatgttctgggccaacagcccttacaggaagccagccaataatgcaccagtg
gctcccataacacgcccattgcagccagtaacggatccgtttgcttttaatagacagact
cttcaaaacacaccagtaggaagttcatccaaaagcagcctgcccaatttgcctggccca
gccctctctgttttttctcagtggcctggtttgcctgtgactcccacaaatgctggggat
agctccacaggattgcatgagcctctgtcaggaactctgtcacagcctagagcagatgcc
agtctatttcctcctgcatctaccccttcttcactccctgggctggaggtgagcaggaat
gctgaggctgatcccagctcaggacatgaagtccagatgctgccacattcagctcactac
attccaggagtgggtcctgagcagcctctcgggggccaaatgaatgacagtgggtccggg
cctgaccaacccatgaataggcatgccccccatgatggtgccgtgacccacgcagcatct
cctttcctccctcagccacagatgccaggtcagtgggggcctgcacaaggaggccctcag
ccctcctatcagcatcactcaccctacctggagggacctgttcagaacatggggctccag
gctgccagcttgccccattttccccctccatctagtctacaccagggacctggccatgag
tctcatgccccacaaacatttactccagcatccttggccagtggtgaagggaatgagata
gttcaccagcaaagtaaaaatcacccattgagtagcttcccccctaaacacacttttgag
cagaattccagaattgggaatatgtgggcaagcccagagttgaagcagaatccgggagtg
aataaagagcatctgctagaccctgcccatgtcaatcccttcactcagggaaatagtcct
gaaaaccaggcgcatcatcccccagtggcagcaactaaccatgccctgcaagaagcagcc
tctggagctctctcaatgttttttcaaggggaagagacagagaatgaggaaaatctctca
tctgaaaaagcaggcctcgataagagattgaacttggatagcttttcttctacctccaga
ctgggccatccaccaccacctggagctagtggtgtctaccaggcctttcctagaggccct
agcagtgaggctgcgcaggaaggagatgcgcaaccttatttttcgcagtctgtgggcgtc
cgtcttgacaaacagagcactgtgccccctgctaatgatgcatggggtgatgttccgggg
accgggacccgctgtgccagtgggccacagtgtgagaatgttgagaacttagaatttgtt
cagaatcaagaagttttgccccgtgagaccctgagtgtggatcccttccccctgagtgat
cagatccgatatgggccccttcctgggccagctgcctccaggcctgctactgtgggcctc
accagaggtggggggctaaatcttgaggccccagacacaccactgcaccctacacgacct
gacagtgtgtcatccagctacagcagccatagccacagaagtcctcctgggtcagccaga
ccccaagaattggtgggcacattcattcagcaagaagttgggaaacttgaagatgatact
tcagggagtttttttaagcaaattgattcttctcctgttggaggtgaaacagatgaggtg
actgggagccaaaattgctgcagcagtctgtcccagccttcaaccccaagccctccaaaa
cctacaggagtattccaaacaagtgcaaacagttcttttgagccagtaaaatcccacttg
gttggagtgaaaccagttgaagcagatcgtgccaacatggtggttgaagtgagagggacc
caatactgtccgaagaagcgcagggcagctgttgcaccacctgatgctacctcaggaaac
ctggaacagccaccagacaacatggagaccccgtgtgcacctcaggcctgccctttgcct
cttagcaccactggagaggctgggcaactggtttcaaacacggcagggacacccctggat
actgtgcgcccagtgcctgataagaggccctcagccagggcccagggacctgtgaagtgt
gagagcccagcaacaactctgtgggcacaaaatgagctgccagattttggtggcaatgtc
cttctagcccctgctgcccctgcactttatgttcctgtaaaaccaaaaccttcagaggtt
gttcatcatccagaaaagggaatgtctggacagaaggcctggaaacaagggtctgtgcca
cctttgcagaaccaagaccctcctggtgcttctgagaaccttgagaaccctcccaaggta
ggagaagaggaggcccttccagtgcaggcaagttctggttatgcgagtttgctttcttcg
ccacccactgaatctttgcacaatcaacctgtcctgattgctcagcctgatcaaagctat
aatttggctcagcctattaatttttctgtgtccttactgaatcctaatgagaagaatcag
tcctggggagatgctgtggtgggggagagatccatagtgagcaacaactgggctctcggt
ggtgatcctgaagaacgtgctgctctgtctggagttccagccagtgctgtcactggcgcg
tctttgcctagcagtatcccccagaattgtgcccctcaaggttcggggtcttctgaaatg
attgctagccagtctgccagttggttggttcaacagctatcccctcaaacccctcaaagt
ccgcatccaaatgcagaaaagggcccttccgagtttgttagtagccctgctggcaataca
agtgtgatgctagttccacctgcaagcagtactttggttcctaacagtaataaggcaaag
cactctagtaaccaggaagaagctgttggcgccctagacttcacattaaatagaactttg
gaaaatcctgtgagaatgtacagcccatctccttcagatggcccagcttctcagcagcct
cttcccaatcatcccagacaatctgggcctgggctgcataaccaggatcatttctaccag
caggtaacaaaagatgctcaggaccagcatagactagaaagagcccagccagagctggtg
cctcctcggccacagaattctccccaagtgccccaagcatcgtgtccagagccttcaaat
cctgaaagcccacccacacaaggacagtctgaaagcttggcccagccaccagcaagtcca
gcttcagtcaacacaggccagctgctgcctcagccaccacaggcttccagtgcatccgtt
acatctaccaactccagccaggcagctgtgcggtcagagcagctgtggctacacccacca
cctcctaatacttttggcccagcacctcaagacttggcatcctactactattacagaccc
ctgtatgatgcctaccagtctcagtacccttcaccgtacccgtcagatcctgggacagcc
tcgctgtactaccaggatatgtatggcctgtatgagcctcgttacagaccctatgacagc
tcagcatctgcttatgccgagaaccaccgctattctgagcctgagcggcccagctcccgt
gcaagtcactattccgaccagcttgctcccaggcaaggatatcctgaaggatactataat
tccaagagtggatggagcagtcacagtgattactatgcaaattattactctggccagtat
gattatggagaccccagccgctgggatcgttactatgggtctcgccttagggatcctcgc
acctgggaccggaggtactggtatgactctgaacatgacccatacaggaaggaccactat
gcttacagtgacaggcctgagaaatgtgatgatcactggaggtatgaccctcgcttcact
gggagcttcgacgatgacgctgagatccacagggacccctatggagaagaagcagacaga
cgcagcatccacagtgagcactcggcacggagcctgcgcagcactcacagtctgcccagc
cgccgcagcagcctcagctcccattcacaccagagtcagatttacagaagccaccatgtg
actggcggttcctttgaggcccctcatgccccaggctcatttcatggtgattatgcctat
ggcacatatgccagcaatttcagcggtgcccatggttttccagagtacagctaccctgca
gacacctcctggcctgctgtggagcaagttccatcaagaccgacctctcctgagaagttt
acggtgcctcatgtctgtgccaggtttggtcctggtggtcagctccttaaagtgattccc
aacctgccttcagaaggacagcctgcactggtggagatccacagcttagagaccttgctg
cagcacacacctgagcaggaagagatgcgctccttcccaggacctctcggcaaagatgat
acccacaaagtagatgttattaactttgcacagaacaaagcaacaaaatgtttgcagaat
gaaagtttaattgataaagagtctgcaagtcttctttggaaattcattattctgttatgc
agacagaatgggactgttgtgggaacagacattgcagagcttttgttacgggaccataga
actgtatggcttcctgggaagtcacccaatgaggcaaacctgatagattttaccaatgag
gctgtggaacaagtggaagaggaggagtcaggggaggcccagctctcatttctcacagac
agtcagacagtgaccaccagcgtgctggagaaggagactgagcggttccgtgagctcttg
ctgtatggccggaagaaggatgctctggagtctgccatgaaaaatggcttatggggtcat
gctcttctgcttgcaagtaagatggacagccggacacatgcccgtgtcatgaccaggttt
gccaacagtcttccaatcaatgaccccctgcagactgtctaccagctcatgtctggacgg
atgcctgctgcatccacgtgttgtggcgatgagaagtggggagattggaggccacatctt
gcaatggttttgtccaacctgaacaacaacatggatgttgaatctaggaccatggctacg
atgggtgatactctagcatcaaaaggcctgttggatgctgcacacttctgctacctgatg
gcccaggttggatttggggtttatacaaagaaaactacaaaacttgtcttgataggctca
aatcacagtttgccctttttaaagtttgccaccaatgaagccattcaaaggacggaggct
tatgagtatgctcagtcccttggggcacatacctgttccttacctaacttccaggtgttt
aaattcatctacttgtgccgcctggctgaaatgggacttgccacacaggccttccactac
tgcgaagtaatagccaagagtgtcctgacacagcctggtgcatactctccagtactgatt
agccagttgactcagatggcttcccagttacgcctcttcgatcctcaactgaaggagaag
ccagaagaggagtcctttgtggagcctgcctggttggtgcagctgcagcacgtggagagg
cagatccaggagggcactgtgctgtggagccaggatggaactgaaccccagcagtgtcgc
attacatcgggctctgaggtggagcagtcagatggccctggactcaaccagcaggcaggg
ccacaggccgacaaccctctactgatgccaagcactgagcctttgatgcatggcgtgcaa
ctgctgcccacagctcctcagacattgcctgatggccagcctgctcacctttccagggtg
ccgatgttcccagtgccaatgtctcgtgggcccctggagctgagtcctgcctatggaccc
ccaggatctgcacttggcttcccagaatcctccagatctgatcctgcagtgctgcatcct
gggcaggccctgccacccactacactaagtctccaggaaagtgggcttccaccccaggag
gccaaaagtccagacccagaaatggtgccacggggctcacctgtcagacactcccctccg
gagctcagtcaagaggagtttggcgagagcttcgctgacccgggctcttccagaacagca
caggacttggaaacctccccagtgtgggatcttggcagctccagtttgacacgtgcacca
tctttgacatctgattctgaagggaagaaacctgcacaggctgtcaaaaaggagcccaag
gagcccaagaagactgagtcctggttctctcgttggctgcctggaaaaaaaaggacagaa
gcttatctaccagatgacaagaacaaatcaattgtttgggatgaaaagaaaaaccagtgg
gtgaatttgaatgaaccagaggaggagaagaaggctccacccccacctccaacatcgttc
cccagggttccccaggtggctcccactgggcctgcaggaccacccacggcctccgtgaat
gtgttttctagaaaagcaggtgggtccagagctcgctatgtggatgttctaaacccaagt
ggaacacagcggagtgaaccagctcttgctcctgcagatttctttgctcctctcgcccca
ctgccaattccttctaacttatttgtaccaaacccagatgcagaagagccacaacctgca
gatgggactggctgtaggggacaggcaccagctgggactcagtctaaggcagagtccacc
ctggaacccaaggtgggaagttctacagtatcagcccctggacctgagctcttaccctcc
aaaccagatggctcccaaggaggagaggctcctggagaccattgtcctacaggggcccct
catggtgggtctgtgcccttttacaaccctgctcagttggtgcaggcttctgtcacctcg
ggaaattcaaggccagggaggattggccaaagaaaatatgcggcattgaactag

All links

Gene (63)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (13)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (49)   
   RefSeq(nuc) (9)   
   GenBank (20)   
   EMBL (20)   
Protein domain (2)   
   Pfam (2)   
All databases (127)   

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