KEGG   Mus musculus (house mouse): 229320
Entry
229320            CDS       T01002                                 
Symbol
Clrn1, A130002D11Rik, USH3, Ush3a, clarin-1
Name
(RefSeq) clarin 1
  KO
K23841  clarin
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    229320 (Clrn1)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   229320 (Clrn1)
SSDB
Motif
Pfam: PsbN MORN
Other DBs
NCBI-GeneID: 229320
NCBI-ProteinID: NP_700434
MGI: 2388124
Ensembl: ENSMUSG00000043850
UniProt: Q8K445 Q8BYX9 B7ZNE8
Position
3:complement(58751449..58792633)
AA seq 232 aa
MPSQQKKIIFCMAGVLSFLCALGVVTAVGTPLWVKATILCKTGALLVNASGKELDKFMGE
MQYGLFHGEGVRQCGLGARPFRFSFFPDLVQAIPVSIHINIILFSMILVVLTMVGTAFFM
YNAFGKPFETLHGPLGLYLVSFISGSCGCLVMILFASEVKVHRLSEKIANFKEGTYAYRT
QNENYTTSFWVVFICFFVHFLNGLLIRLAGFQFPFTKSKETETTNVASDLMY
NT seq 699 nt   +upstreamnt  +downstreamnt
atgccaagccagcagaagaagatcatcttttgcatggctggcgtactgagctttctctgt
gctcttggagtggtgacagcagtgggcaccccactgtgggttaaagccactatcctctgc
aaaacaggggctctgcttgtcaacgcgtcagggaaggagctggacaagttcatgggcgag
atgcagtatggccttttccacggagaaggcgtaaggcaatgtgggttaggagcaaggcct
ttccggttctcattcttcccagatttggtccaagccatccccgtaagcatccacatcaat
attattctcttctccatgattcttgtcgtcttaaccatggtggggacagccttcttcatg
tacaatgcttttggcaagccctttgaaactcttcatggaccactggggctctatctggtc
agcttcatttcaggctcctgtggctgtcttgtcatgatattgtttgcctctgaagtgaaa
gtccaccgcctttcagagaaaattgcaaattttaaagaagggacctatgcctacagaaca
caaaacgaaaactataccacctcattctgggttgttttcatttgcttttttgttcatttt
ttgaatgggctcctgatacgacttgctggatttcagttccctttcacaaaatctaaagaa
acagagaccactaatgtagcttcagatttaatgtactga

  All links  
Gene (5)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (23)   
   RefSeq(nuc) (3)   
   GenBank (10)   
   EMBL (10)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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