KEGG   Mus musculus (mouse): 230484
Entry
230484            CDS       T01002                                 

Gene name
Usp1
Definition
(RefSeq) ubiquitin specific peptidase 1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
mmu  Mus musculus (mouse)
Pathway
mmu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    230484 (Usp1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mmu01002]
    230484 (Usp1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    230484 (Usp1)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    230484 (Usp1)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     230484 (Usp1)
Peptidases and inhibitors [BR:mmu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   230484 (Usp1)
Ubiquitin system [BR:mmu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    230484 (Usp1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     230484 (Usp1)
SSDB
Motif
Pfam: UCH UCH_1 DUF4140
Other DBs
NCBI-GeneID: 230484
NCBI-ProteinID: NP_001288343
MGI: 2385198
Ensembl: ENSMUSG00000028560
Vega: OTTMUSG00000008702
UniProt: Q8BJQ2
Position
4; 4 C6
AA seq 784 aa
MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKTSEYRGSEIDQV
VPAAQSSPVSCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKTGVKHLFNIISRKK
EALKDDSNQKDKGSCKEESLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRR
LLNTLRELNPMYEGFLQHDAQEVLQCILGNIQETCQLLKKEEIKNLAELSGKVEEQSLQK
EETGGITSTEIDSMRNTEDVKEQLPKGNWKRKSDSESSNVKKKVKLSRESQPLEENQRQT
RSKRKAIGDTLEAAPKIIPKCVSESESAKPSQKKSKVKINWLKPSTKQPSILSKFCSLGK
ITTNQRSKGQPKEKEGDVEEDLEKYGSDHTANGGPESPGSSVTPVDSSEAKSGNKGAEQI
GFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKTE
MKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGLE
FDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT
DLNSLELDEGNFVVDQMCELGKPEPLTEEQARGTAGNYDDEVSIRVGGNAQPSKVLNKKN
VEGIGLLGGQKSKADYELYNKASNPDKVVGTPFTDNRNSETNDTTNGTHESDRNKESSDQ
TGVNMNGLENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLF
YKKL
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgcctggcgtcatacctagtgaaagtaatgggctttcaagaggcagtccatccaagaaa
aacagactgtctctgaagttttttcagaaaaaggaaactaaaagagccttagactttact
gattctcaagaaaatgaagaaaaaacttctgaatatagaggatctgagattgaccaagtt
gttcctgctgcacagtcctccccagtaagctgcgagaagagagagaacttgttaccattt
gtgggattgaataaccttggcaacacttgttatctgaatagtattcttcaggtgttatac
ttttgtcctggctttaagactggagtgaagcacttatttaatattatttcaaggaagaaa
gaagctctgaaggatgactctaatcagaaggataagggaagctgcaaagaagagtctttg
gcaagttatgagcttatatgtagtttacagtccttaataatttcagttgaacagcttcag
gctagttttctcttaaatccagagaaatatacagatgaacttgctacacagccaaggcga
ctgctgaacacactcagggaactcaaccctatgtatgaaggatttctacagcatgatgca
caggaagtgctacagtgtattctgggaaacattcaagaaacatgccaactcctaaaaaaa
gaagaaataaaaaacctggctgaattatccggcaaggttgaagaacaatctcttcagaaa
gaggaaacaggtggaattaccagcacagagattgacagtatgaggaatacggaggacgtc
aaagagcagctccccaaagggaactggaaaagaaaaagtgacagtgagtcgagtaacgtg
aagaaaaaggttaaactgtccagggaatcccagccattggaagaaaaccagagacaaacc
agatccaagagaaaagctatcggagacacactagaggctgctcctaagatcatccccaag
tgtgtttctgaaagtgagagtgcaaagccctcacagaagaaatcaaaagttaaaataaat
tggttaaagccatccactaagcaacccagcattctttccaagttctgtagtcttggaaaa
ataacaactaaccagcgctccaaaggacaacctaaggaaaaggagggtgatgttgaagag
gacttggagaagtacggaagtgaccacacagctaatggtggacccgaatctccaggaagt
agcgtcacacctgtggacagcagtgaagccaagtccggaaacaaaggtgctgaacagatt
ggctttgagctagtagagaaactgtttcaaggtcagctcgtgttaaggactcggtgtttg
gaatgtgaaagcttaacagaaagaagagaagatttccaggatattagtgttccagtgcaa
gaagatgagctttccaaggtcgaggagagctctgaaatttctccagagccaaaaacagaa
atgaagaccttgagatgggcaatttcacagtttgcttcagtggagagaattgtaggagag
gataaatacttctgtgaaaattgccatcattatacggaagcagagcgaagtctcctgttt
gataaaatgcctgaagttatcactattcatctgaagtgctttgctgctagtggcttggag
tttgactgttacggtggtggactttccaagatcaacactcctttattgacacctcttaaa
ctgtcactagaagaatggagcacaaagccgacgaatgacagctatggattatttgccgtt
gtgatgcacagtggcattactattagtagtgggcactataccgcatctgttaaagtcact
gaccttaacagtctagagctcgatgaggggaattttgtggttgaccagatgtgtgaacta
ggtaagccagagccactgaccgaggagcaagcaagggggacggctgggaactacgacgat
gaagtatcaattagagttggtggaaatgcccagccaagtaaagttttgaacaaaaaaaat
gtagaaggtattggacttctcggtggacaaaagagcaaagcagattatgagctgtacaac
aaagcatctaatcctgataaggtggttgggacaccattcaccgacaatagaaattctgaa
actaatgatactactaatgggacccacgaatctgacaggaacaaggaatccagtgaccaa
acaggcgttaacatgaacggacttgagaacaaaatttcctatgtagtgcaaagcttaaag
gagtacgaggggaagtggttgctctttgacgattctgaggtaaaagtgacagaagagaaa
gactttctgaattctctctccccttctacatcccctacgtctactccctacttgctattc
tataaaaaattatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (57)   

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