KEGG   Mus musculus (house mouse): 230872
Entry
230872            CDS       T01002                                 
Symbol
Crocc
Name
(RefSeq) ciliary rootlet coiled-coil, rootletin
  KO
K16469  rootletin
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    230872 (Crocc)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   230872 (Crocc)
SSDB
Motif
Pfam: Rootletin
Other DBs
NCBI-GeneID: 230872
NCBI-ProteinID: NP_742120
MGI: 3529431
Ensembl: ENSMUSG00000040860
UniProt: Q8CJ40
Position
4:complement(140743948..140787927)
AA seq 2009 aa
MSLGLAGSLQAQLALEIVIQSLENCVLGPNQEKSLSVQNRVQDFQGASLLVCAREVIASN
LSRPETPAPLQVPEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVNERL
EQAVRLETGELEAQEPRGLVRQSVELRRQLQEEQSSYRRKLQAYQEGQQRQAQLVQRLQA
KILQYKKQCSELEKQLMDRSTELEQQRLRDTEHSQDLDSALLRLEEEQQRSASLAQVNAM
LREQLDQANLANQALSEDIRKVTSDWTRSCKELEQREAVWRREEESFNTYFSSEHSRLLR
LWRQVMGLRRQASEVKMGTERDLLQLGGELVRTSRAVQELGLGLSASLHRAESKAEAALE
KQKLLQAQLEEQLQAKLLREKDLAQLQVQSDLDKADLSARVTELALSVEHLQNQNSEKDQ
VNRTLSDKLEALESLRLQEQTTLDTEDGEGLQQTLRDLAQAALSDTESGVQLSSSERTAD
TSDGSLRGFSGQRTPTPPRHSPGRGRSPRRGLSPACSDSSTLTLIHSALHKRQLQVQDMR
GRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANE
LLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARR
ELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQ
LELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHA
TTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQL
SRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEA
IRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTE
EKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQ
LQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLM
GTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELE
ERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEAS
ELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAK
EAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKE
SRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKR
LLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSA
LRRGLGLGRVSSSPAREAPAGGSGDGLSSPSPLEYSPRSQPPSPGLIASPAPPDLDPEAV
RDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAW
RSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMK
ATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRVD
SLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQD
KNLHLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGD
AEGQLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERS
ALQFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRTLTGAELDLAEAQQQIQHL
EAQVDVALEGNHNPVQPEAGEQQLELQQEVERLRSAQVQTERTLEARERAHRQRVSGLEE
QVSTLKAQLHQELRRSSASVSLPPGTPEK
NT seq 6030 nt   +upstreamnt  +downstreamnt
atgagcctggggctggcaggatctctgcaggctcagctggcactggagattgtgatccag
tctctggagaactgtgttctgggaccaaaccaagagaagagcctgagtgtgcagaaccgg
gtccaggacttccagggagccagcctgcttgtctgcgccagggaggtcatcgccagcaac
ctctcccggcctgagaccccagccccactccaggtcccagagatggcctcactgctgtcg
ctgcaggaggaaaaccagctgctgcagcaggagctgtcccgcgtggaggacctgctggcc
cagagccgcgcagagcgggatgagctggccatcaagtacaatgctgtcaatgagaggctg
gagcaggctgtgcggctggaaactggggagctggaggcacaggagcccagagggctggtg
cggcagagcgtggagctgcggaggcagctgcaggaggagcagtcctcctaccggcgcaag
ctgcaggcctaccaggagggccagcagcggcaggcccagctagtgcagcggctgcaggcc
aagattctgcagtacaagaagcagtgctcagagctggagaagcagctgatggacaggtct
actgaactggagcagcagcgactgagggacacagaacacagccaggacctggacagcgct
cttctgcgcctagaggaggaacagcagagaagtgccagcctggcccaggtgaatgccatg
ctgagagagcagctggaccaggccaacttggccaaccaggctctgagcgaggacatacgc
aaggtgaccagtgactggacccgcagctgtaaggagctggagcagcgggaggcagtgtgg
aggcgcgaggaagagtccttcaacacctacttcagcagcgagcacagccgcctgctccgc
ctctggaggcaggtcatggggctccgacggcaggccagcgaggtgaagatgggcacggag
agggacttgttgcagctgggcggggagctcgtccgcacatcccgggctgtccaggagctg
ggcctcggactgagtgccagcctgcatcgggctgagagcaaggcagaggcagctctggag
aagcaaaagctgctgcaggcccaactagaggagcagctacaggccaagctgctccgggag
aaggacctggcccaactgcaggtgcagagtgacctggacaaggctgatctcagtgccaga
gtgacagagctggccctgtccgtggagcaccttcagaatcagaactcagagaaggaccag
gtcaacaggaccctctctgacaagctggaggccctggagtcactgcggcttcaggaacag
acaaccctggacactgaggatggagaggggctgcagcagaccctgagggacctggcacag
gctgccctatctgacactgagagtggtgtgcagctcagcagctcagagcgcactgcggac
acctctgacggcagcctgcgcgggttctctggccagcggactccaactccaccgcggcat
tctccgggtcgaggtcgttctccgcgccgaggcctgtccccagcctgctccgactcctcc
acactcacgctgatccactcagccctgcacaagcgccagctacaggttcaggacatgcgt
ggacgctatgaagccagccaagaactgctgggttccgtacgcaagcagctcagtgacagt
gagggcgagcggcgtggcctggaggagcagctacagcgcctgcgggaccagacagcagcc
tcagcccaggcccaagaggatgcgcagcgcgaggcccagcgcctacgcagtgccaacgag
ctcctgagcagggagaaggggaacctgacccacagcctgcaggtgacccagcagcaagct
aaggagctgcgccaggagctggagaagctgcaggctgcccaggaggagctgaaacgtcag
cataaccaactggaggacgcgcaggaggactcggtgcaggagggcgcccgggcccgccgg
gagctggagcgcagccataggcagctggaacagctggaggtgaagcgctcagggctgact
aaggagctggtggaggtgcgggaggcactgagctgcgccatactgcagagggatgtactg
cagacggagaaggcagaggtggccgaggcgctaaccaaggctgaagcaggccgagcgcag
ctggagctctccctgaccaagctgagggcagaggaggcctccctgcgagactccttatcc
aagatgagtgccctgaatgagagcctcgcccaggacaagctggaattaaaccgccttatc
gcccagctagaggaagaaaaggtggcactcctgggccgccagcagcaggcagaacatgcc
actacgatggccgtggagaagcaggaacttttggagcagctgaggctggagcaggaggtg
gagaggcagggcctacagggctccctgtgtgtggctgagcaggcccgggaggcgctggaa
caacagatccttgtactgcgcagcgaacgcagccatctgcaggagcagttggcccagctc
tcccggcagctgagtggacgggaccaggagctggagcaagccctgcgggagtcccagcgg
caggtggaagcactggagcgcgctgcccgggagaaggaggctatggccaaggagcgggct
ggcctggcagtgaagctggcagcagcagagcgggagggccggaccctgtcagaggaggcc
attcgcctgcgcctggagaaggaggccctggagagcagcctatttgacgtgcagaggcag
ctggctcagctcgaggcccgccgagagcagctagaagccgacagtcaagccctgctgctg
gccaaggaaactctgactggggagctggcaggcctacggcagcaggtaacatccacagaa
gagaaggcagccttggacaaggagctgatgacccagaagctagtgcaagccgagcgggag
gcacaggcctctctgcgggagcagcgggcagcccatgaggaggatctccagagactgcag
catgagaaggaggctgcatggcgggagcttcaggcagagcgggcccagctgcagggccag
ctgcagcaggagcgagaggagctgctggcacggatggaggccgagaaggaggagctgagc
aaggagattgccgcgctgcagcaggagcgggacgagggcctgctgctggcagagagcgaa
aagcagcaggccttgtccctgaaggagtccgagaagacggcgctgtcggagaagttgatg
ggaactcggcacagtctggctgccatctctctggagatggaacggcagaagcgagatgcc
cagagccggcaggaacaggaccggaacacactgaacgccctgacatctgaacttcgagac
ctccgggcccagctggaggaagccactgccgcccatgcccagacggtgaaagagctggag
gaacggacggggaacctgggccggcagcgggaggcctgcatgcgggaggcagaagagctg
aggactcagctgcgtgtgttggaggacacccgcgatgggctgcggcgggagctgctggag
gctcagcgtaagggtcgggacagtcaggacagctccgaagcccatcgccaagaggctagt
gagctgcggcgcagcctgagtgagggcgccaaggagcgggaggccctgcggcggtccaac
gaggagctgaggtctgcagtgaagaaggcggagagtgagcgcatcagcctgaagcttgcc
aatgaggacaaggagcagaagttggccctcctggaagaggctcgagtgtctgtagccaag
gaggctggagagctgcgggcctcgctgcaggaggtggagcgatcccggctggaggctcga
cgtgagctgcaggagcttaggcgacagatgaagacactggacagtgacaatggcaggctg
ggccgggagctggcagacctgcagggccgcttggccctgggtgagcggacggagaaggag
agcaggcgagaggccctgggcctacggcagaggttgctgaaaggcgagagcagcctggaa
gccctgaaacaggagctccagggttcccagaggaagctgcaggagcaagaggccgagttc
cgggcgcgggagcgaggcctgttgggctccctggaggaggcgcgtggtgccgagaagagg
cttctggactctgcccgcagcctggagctgaggctggaggcggtgcgggcagagacctca
gagctggggctgcggctgagcgcggccgagggccgggcgcagggtctggaggtcgagctt
gcccgcgtggaggcgcagcggcgggtggccgaggcccagctaggcggcctgcgctccgcc
ctgcgccggggcctaggcctgggccgagtgtccagctccccagcccgggaggcgcctgct
ggaggaagtggggatggtcttagcagccccagtcctttggaatatagccctcggtcccag
cccccctctccagggctcattgcctccccggcacctccagacttggacccagaagctgtg
cgtgatgccctccgagacttcctgcaagagctgcggagcgcccagcgggagcgggatgaa
cttaaggtccagaccagcaccctgagccaacagctggtggagatggaggcagagagagac
catgcagcctcaagggccaagcagctgcagaaggcagtcgctgagagcgaggaagcctgg
cgcagtgcagacaggcggctgagcggggcccaggcagagctggcactgcaggaagagagt
gtgcgacgtagcaagcgggagtgcagggccacgctggaccagatggcagtgctggagagg
agcctgcaggccaccgagagcgagctccgagccagccaggagaaagtcagcaagatgaag
gccaccgaggcgaagctggagagcgacaagcggcggctgaaggaggtgctggatgcctct
gagagccgctccatcaaactggagctgcagcggcgcgctcttgagggcgagctgcagcgc
agccgcctcggcctgggggaccgggaggcccatgcgcaggccctccaggatcgggtggac
tccctgcagagacaggtggcagacagtgaggtgaaggcagggaccttacagctgacagtg
gagcggctcagtggggcactggccaaggtggaggagagcgaggggaacctgcggagcaag
gtgcagagcttgacagatgccctgacccagagcagcgccagcctcagcagcactcaggac
aagaatctgcacctacagaaggccttgagtacctgtgaacatgaccgccaagtgctacag
gaacggctggatgcagccagacaggcattgtctgaagcgcgaagacaaagcagctccctg
ggtgaacaggtgcagactttgaggggcgagctggccagcctggagctgcagcggggcgat
gctgagggccagctgcagcagctgcagcaggcgctgcgacagcggcaggaaggggaggcc
atggctctgcgctccgtccagaagctgcaggaggagcggcgcctgttgcaggagcgcctg
ggcagtctgcagcgagccctggcccagctggaagctgagaaacgtgatctggagcgctca
gccctgcagttcgacaaggaccgtgtggccctcaggaagacgctggataaggtggagcgg
gagaagcttcgaagccatgaggacaccctgcgcttgaatgcagagaggggccgcctggac
cgcacactcacaggagctgagctggacctggccgaggcccaacagcagatccaacatttg
gaggcacaggtggatgtagccctggaggggaaccacaatccggtccagccagaggcgggt
gagcagcaactggaactgcaacaggaggttgaacgcctgcgcagtgcccaggtacagacg
gagcgcacactggaggcacgggagcgggcccaccgccagagggtgtcagggctcgaggag
caggtatccacactgaaggcacagctacaccaggagcttcgcaggagctcggcatccgtc
tccctaccccctggcacccctgagaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (133)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (127)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (32)   
   RefSeq(nuc) (8)   
   GenBank (12)   
   EMBL (12)   
Protein domain (1)   
   Pfam (1)   
All databases (177)   

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