KEGG   Mus musculus (house mouse): 239167
Entry
239167            CDS       T01002                                 
Symbol
Synb, D930020E02Rik, syncytin-B
Name
(RefSeq) syncytin b
  KO
K24396  syncytin-2
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09185 Viral protein families
   03210 Viral fusion proteins [BR:mmu03210]
    239167 (Synb)
Viral fusion proteins [BR:mmu03210]
 Class I fusion proteins
  Metazoa
   239167 (Synb)
SSDB
Motif
Pfam: TLV_coat
Other DBs
NCBI-GeneID: 239167
NCBI-ProteinID: NP_775596
MGI: 3045308
Ensembl: ENSMUSG00000047977
UniProt: Q8BI41
Position
14:complement(69527827..69549857)
AA seq 618 aa
MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPA
PLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLV
SSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYAT
FVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSK
PAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKL
QGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSG
VFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSP
HLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGV
VLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQW
PDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQN
FQYKKLPQDSPDEDTIPT
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgacaggcttttgggtcctctgtttcgtccttttcccctcctccttatcctatccggaa
agctggatgccccttgtaaacctcactcaccacatcctacgtgataccaactcttccctg
ttttccaactgttgggtctgcttgtctacccaaacccagcggtccttagcagtcccagcc
cctctgtccatttggacagatacacccatgaagcttcatcttacctactcagtcaggccc
ttctctggctccttttccattagcgacattgaaagacgcctccgtctcttccgcccactg
actgcctcctattctttccacaatcctgacagaagggcgattgcttttcttcaactcgtc
agctcaacaggcatatttcggatcatcacccggataacctctgtgatatatccccataag
gaccgtttcttcgaatctgcccaacgccctctctggggaccactctttactgagaccgtg
ctcaggtcgcaggccccactctgcatatctcgctttttcaaggtctcagcatatgccact
tttgtaggcaacctctctgcctctctctgcaactacaccatgcatatttcaccttctacc
agtcatgaaaacctagatctttccaccacccatacgttcaaacaggcaatgaaaagaccg
gatgccaaatggaaaaacccgctccgtttttccgggcccccctccctcatcttctcgaag
ccggcttactatccctgcccaacagacatcaaacactgccatacctctccggccactccc
tggatgcactgtcctcaggctcccttcggcacctgctataacctcactttatttgaacca
gacaactcaacccaccctgttaccatgtcagtgaaccctacccacttcaaggtcaaactc
caggggcacagagacccctatccgctctcccattaccagcccctcacgggagctgccctg
tctggacaatattcagtctgggagaacgagatcactgtccaagaaaactgggacatcacc
tccaacattttctcacatcttctcagcttctcgtacgccttctgcctcaactcttcaggc
gttttcttcctctgcggaacatcgacttacatctgcctcccagccaattggtccggtgtc
tgtaccctggtcttccaatacccggatattgaacttctccccaataaccaaacggtgcct
gttcccctttttgcttcagttctttcctcagactcagttcttcgcccaaagaggtcccct
cacctctttcccttccttgcaggcctgggtatctcttctgcccttggtacggggatagct
ggcttggccacctcgactctctatttccaacagctttctaaggttctttccgaaaccttg
gaagaaatagctgcctctatcactaccctccagaaccaaatagactcgctcgcaggtgtt
gttctacaaaaccgccgagctctggacctcatcactgctgagaaagggggcacctgtctc
ttcctccaggaagagtgctgcttctacgtaaaccagtctggaatagtccgggacgcggca
aggaaactccaagaacgagcatctgaactcggccagcattctgactcttggggacagtgg
cctgaccttggacgttggttgccctggctgactccctttctgggacctcttctcttcctc
ttcttcctactgacatttgggtcttgtcttctgaactgcctaacccgttttgtgtcccag
agacttggctcctttgttcaagacactgccaaaaggcatgtggacagcatcctccaaaat
ttccaatataaaaaactgccccaagactccccagatgaggacaccattcctacataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (59)   

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