KEGG   Mus musculus (house mouse): 23996
Entry
23996             CDS       T01002                                 
Symbol
Psmc4, CIP21, MIP224
Name
(RefSeq) 26S proteasome regulatory subunit 6B
  KO
K03063  26S proteasome regulatory subunit T3
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03050  Proteasome
mmu05010  Alzheimer disease
mmu05012  Parkinson disease
mmu05014  Amyotrophic lateral sclerosis
mmu05016  Huntington disease
mmu05017  Spinocerebellar ataxia
mmu05020  Prion disease
mmu05022  Pathways of neurodegeneration - multiple diseases
mmu05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    23996 (Psmc4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    23996 (Psmc4)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    23996 (Psmc4)
   05012 Parkinson disease
    23996 (Psmc4)
   05014 Amyotrophic lateral sclerosis
    23996 (Psmc4)
   05016 Huntington disease
    23996 (Psmc4)
   05017 Spinocerebellar ataxia
    23996 (Psmc4)
   05020 Prion disease
    23996 (Psmc4)
   05022 Pathways of neurodegeneration - multiple diseases
    23996 (Psmc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:mmu03051]
    23996 (Psmc4)
Proteasome [BR:mmu03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     23996 (Psmc4)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_5 AAA_2 AAA_lid_3 AAA_16 RuvB_N AAA_22 nSTAND3 DUF815 NPHP3_N AAA_28 RNA_helicase AAA_14 Mg_chelatase TIP49 NTPase_1 TsaE ATPase_2 NACHT CCDC136_middle AAA_3 AAA_7 NB-ARC AAA_18 AAA_33 Parvo_NS1 AAA_17 AAA_lid_PRS2_C AAA_25 IstB_IS21 AAA_24 ABC_tran DUF3450
Other DBs
NCBI-GeneID: 23996
NCBI-ProteinID: NP_036004
MGI: 1346093
Ensembl: ENSMUSG00000030603
UniProt: P54775
Structure
Position
7:complement(27741127..27749517)
AA seq 418 aa
MEEIGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggaggagataggcattttggtggaaaagattcaggatgagattccagcactgtccgtg
tctcggccgcagaccggcctgtcctttctgggacccgaacctgaagacctggaggacctg
tacagccgctacaagaagctgcagcaggagctggagttcctggaagtgcaggaggagtat
atcaaggacgagcagaagaacctgaagaaggaattcctccacgcccaggaggaggtgaag
cggatccagagcatccccttggtcatcggtcagttcttggaagctgtggatcagaacaca
gccatcgtgggctccaccacaggctctaactattatgtgcgcatcctgagtaccatcgac
cgggagctgctcaagcccaacgcctcggtggccctgcacaagcacagcaatgccctggtg
gacgtgctgcctcccgaggccgacagcagcatcatgatgctcacctcagaccagaagcca
gatgtgatgtatgccgatatcggaggcatggacatccagaagcaggaggtgagggaggct
gtggaactcccgcttacacacttcgagctgtacaagcagattggcatcgatcctccccga
ggtgtcctcatgtatggccctcctggctgtggaaagacaatgttagcaaaggctgtggca
catcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagtacctg
ggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacctgcc
atcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagacagga
gctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatttgac
cagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatccagct
ctactgcggccaggacgcctggaccgaaaaattgaattcccactccctgaccgtcgccag
aagaggttgattttctccaccatcaccagcaaaatgaacctctctgaggaggtcgacctg
gaagactatgtggcccgtccagataagatttcaggagccgatatcaactccatctgtcag
gagagtggaatgttggctgtccgtgagaaccgctacattgtcctggccaaggacttcgag
aaagcatacaagaccgtgatcaagaaagatgaacaggaacatgaattttacaagtga

  All links  
Gene (48)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (35)   
   RefSeq(nuc) (1)   
   GenBank (17)   
   EMBL (17)   
3D Structure (1)   
   PDB (1)   
Protein domain (34)   
   Pfam (34)   
All databases (121)   

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