KEGG   Mus musculus (house mouse): 24116
Entry
24116             CDS       T01002                                 
Symbol
Nelfa, Whsc2, Whsc2h
Name
(RefSeq) negative elongation factor complex member A, Whsc2
  KO
K15179  negative elongation factor A
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    24116 (Nelfa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    24116 (Nelfa)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     24116 (Nelfa)
SSDB
Motif
Pfam: NELF-A_N CathepsinC_exc
Other DBs
NCBI-GeneID: 24116
NCBI-ProteinID: NP_036044
MGI: 1346098
Ensembl: ENSMUSG00000029111
UniProt: Q8BG30
Position
5:complement(34055263..34093615)
AA seq 530 aa
MASMRESDTGLWLHNKLGATDELWAPPSIASLLTAAVIDNIRLCFHRLSSAVKLKLLLGT
LHLPRRTVDEMKAALMDIIQLATLDSDPWVLMVADILKSFPDTGSLNLDLEEQNPNVQDI
LGELREKVSECEASAMLPLECQYLNKNALTTLAGPLTPPVKHFQLKRKPKSATLRAELLQ
KSTETAQQLKRSAGVPFHAKGRGLLRKMDTTTPLKGIPKQAPFRSPTTPSVFSPSGNRTP
IPPSRTPLQKERGVKLLDISELNTVGAGREAKRRRKTLDTEVVEKPTKEETVVENATPDY
AAGLVSTQKLGSLNSEPTLPSTSYLPSTPSVVPASSYIPSSETPPAPPSREASRPPEEPS
APSPTLPTQFKQRAPMYNSGLSPATPAPAAPTSPLTPTTPPAVTPTAQTPPVAMVAPQTQ
APAPVQQQPKKNLSLTREQMFAAQEMFKTANKVTRPEKALILGFMAGSRENPCPEQGDVI
QIKLSEHTEDLPKADGQGSTTMLVDTVFEMNYATGQWTRFKKYKPMTNVS
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcttccatgagggagagtgacaccggcctgtggctgcacaacaagctgggcgccacg
gacgagctgtgggcgccacccagcatcgcgtccctgctcaccgccgcggtcatcgataac
atccgcctctgcttccaccgcctctcctcggccgtgaagctcaagctactgctcgggacg
ctgcatctcccgcgccgcaccgtggacgagatgaaggcggctctgatggatatcatccag
ctggccacgctggactcagacccctgggtcctcatggttgctgacattctgaagtccttc
cctgacacgggctccttgaatctggaccttgaggaacagaaccccaatgttcaagacatc
ttaggagaacttagagaaaaagtgagtgagtgcgaggcatctgccatgctaccactggag
tgccagtacctgaacaagaatgccctgaccacccttgctgggcccctcaccccaccagtc
aagcattttcagctaaagcggaaacctaagagtgccacgctgcgggcagaactgctgcag
aaatctaccgagacagcccagcagctgaagagaagtgctggggtcccattccacgctaag
ggccgggggctgcttcgaaagatggacactacaacccctctcaaaggcattccgaagcaa
gcccccttccgaagtcccaccacacccagcgtcttcagtccttctgggaaccggactcca
ataccaccttcgaggacgccactgcagaaagaaaggggtgtgaagctgctggatatttct
gagctgaatacagttggtgctggacgagaggcaaagaggaggaggaagactttagacaca
gaagtggtagaaaagcccaccaaggaagagacggttgttgaaaacgctacccctgactat
gctgctggcctggtatccacacagaaacttgggtctctgaacagtgagccaacactgccc
tccacaagttacctgccctctacacccagtgtggtacctgcctcatcttacatccccagc
tctgagactcccccagctccaccctctcgggaagccagccggccacctgaggaacccagc
gctccaagtcccacactgccaacacagtttaaacaaagggcacctatgtataacagtggc
ctgagcccagctacaccagcacctgcagcacctacctcacctctgacacctactactccc
ccagctgtcactcctactgctcagacacctccagtggccatggtggcccctcagacccag
gctccagcccctgttcagcagcaacctaaaaagaacctgtccctcactagagaacagatg
tttgctgcccaggagatgttcaagacggcaaacaaggtcactcggccggagaaggccctc
atcctgggcttcatggctggctctcgagagaacccatgcccggagcagggggatgtgatc
cagatcaagctcagtgaacacacagaggatctgcccaaggcagacggccagggcagtacc
accatgctagtggacacagtgttcgagatgaactacgccacaggccagtggacacgcttc
aagaagtacaagcctatgaccaatgtgtcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (39)   
   RefSeq(nuc) (7)   
   GenBank (16)   
   EMBL (16)   
Protein domain (2)   
   Pfam (2)   
All databases (73)   

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